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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Csa11g008990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family | bZIP | ||||||||
Protein Properties | Length: 458aa MW: 50059.7 Da PI: 10.1485 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.6 | 1.3e-13 | 379 | 423 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+k+ Csa11g008990.1 379 RRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQ 423 69*************************************998764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.6E-14 | 375 | 440 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 377 | 422 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 379 | 435 | No hit | No description |
CDD | cd14707 | 1.18E-25 | 379 | 433 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-10 | 379 | 428 | No hit | No description |
Pfam | PF00170 | 1.3E-11 | 379 | 432 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 382 | 397 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MMGSRTNLKN FVDGLTDEVG VNTKQQPMMG SSSTLPLTRQ NSVFSLTFDE FQNSWGGGIG 60 KDFGSMNMDE LLKNIWTAEE SHSLMGNNTG FNNINNGING NGGVINNING GVSVVGVGGE 120 TGGGFFNGGS LQRQGSLTLP RTISQKTVDD VWKELMKEDD IGNGVANVGT SGIPQRQQTL 180 GEMTLEQFLL RAGVVREEPP QVQQPVNNFN GGFYGFGSNA GLGTTPNMIG ANQPHSFAGN 240 GAVVRPDLLT TQTQPLQMQQ SQRVQQPQPL IQKQERPFPK QTTIAFSNTV DALNRSQPVT 300 QFQEVKPSIL GKRNHPMDNN LLQAVDFKTG VTVAAVSPGS QMSPDLTPKS ALDASLSPVP 360 YMFGRVRKTG AVLEKVIERR QKRMIKNRES AARSRARKQA YTMELEAEIA QLKELNEELQ 420 KKQVAIMEKQ KNQLLEPLRQ PMGCKRQCLR RTLTGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Csa11g008990.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF093546 | 0.0 | AF093546.1 Arabidopsis thaliana clone 11 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds. | |||
GenBank | AK175851 | 0.0 | AK175851.1 Arabidopsis thaliana mRNA for abscisic acid responsive elements-binding factor (ABRE/ABF3), complete cds, clone: RAFL22-47-B14. | |||
GenBank | AY054605 | 0.0 | AY054605.1 Arabidopsis thaliana Unknown protein (F17I5.190:F17I5.200) mRNA, complete cds. | |||
GenBank | AY081467 | 0.0 | AY081467.1 Arabidopsis thaliana unknown protein (F17I5.190:F17I5.200) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010437681.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_010437682.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | E4MY11 | 0.0 | E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01 | ||||
TrEMBL | V4MBG2 | 0.0 | V4MBG2_EUTSA; Uncharacterized protein | ||||
STRING | XP_010437681.1 | 0.0 | (Camelina sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 0.0 | abscisic acid responsive elements-binding factor 3 |