 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g004370.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
MYB |
| Protein Properties |
Length: 313aa MW: 34124.9 Da PI: 7.0359 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g004370.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 62.3 | 9.6e-20 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw +
Csa11g004370.1 14 KGPWSPEEDDLLQRLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++eEd+ +++a++++G++ W+tI+r ++ gRt++ +k++w++
Csa11g004370.1 68 AFSQEEDDTIIRAHARFGNK-WATISRLLN-GRTDNAIKNHWNST 110
79******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MSNPTTRKNM ERIKGPWSPE EDDLLQRLVQ KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60
SPEVEHRAFS QEEDDTIIRA HARFGNKWAT ISRLLNGRTD NAIKNHWNST LKRKCSGGYD 120
GNLGEEQPLK RTASGGVSTG LYMSPGSPSG SDVSEQSSGQ GQQHVFNKPT VRSEVTASSS 180
GEDPPTYLSL SLPWTEETVR VNEAPQLNQN TVMDGGYTAE LFPVRKEEDV EVEEDPKGIS 240
GGFGGEFMTV VQDMIRTEVR SYMADLQRGN IGGSGGGSSG GGGGSCMPQS VNSRRVGFRE 300
FIVNQIGIGK ME*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL161591 | 1e-141 | AL161591.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87. |
| GenBank | AY063912 | 1e-141 | AY063912.1 Arabidopsis thaliana putative myb-related protein (At4g37260) mRNA, complete cds. |
| GenBank | AY091267 | 1e-141 | AY091267.1 Arabidopsis thaliana putative myb-related protein (At4g37260) mRNA, complete cds. |
| GenBank | AY519613 | 1e-141 | AY519613.1 Arabidopsis thaliana MYB transcription factor (At4g37260) mRNA, complete cds. |
| GenBank | CP002687 | 1e-141 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
| GenBank | Z99707 | 1e-141 | Z99707.1 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1. |
