 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g002900.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 291aa MW: 33060.7 Da PI: 4.8438 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g002900.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 67.1 | 3.3e-21 | 101 | 151 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a++ a+ kl+ge
Csa11g002900.1 101 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDLAAYKLRGE 151
59******9.**********965...5**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MAAIDMFNSN TDLSDPFKEE LMKALQPFTN NTVSSSSFSS PCPYSNTIFG FNQTTPLGLN 60
QLTPYQIHQI QNQLNQRRNT IISPNLAPRP VPMKSMATQK LYRGVRQRHW GKWVAEIRLP 120
KNRTRLWLGT FDTAEEAAMA YDLAAYKLRG EFARLNFPQF RHEDGYYGGD SFFNPLHSSV 180
DAKLQAICQS LRKTEDDDHH RIHLPCSETE LFPPKTEYQE SDEYGFLRSV ENSFSDESQV 240
ESSSPESCVT TNTTFLDFSE SGFDEIGSFG LEKFPSVEID WDAISKLSES *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL022605 | 0.0 | AL022605.3 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project). |
| GenBank | AL161595 | 0.0 | AL161595.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91. |
| GenBank | BT025719 | 0.0 | BT025719.1 Arabidopsis thaliana At4g39780 mRNA, complete cds. |
| GenBank | CP002687 | 0.0 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
