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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa09g099240.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
ERF |
| Protein Properties |
Length: 340aa MW: 37106.7 Da PI: 7.6136 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa09g099240.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.8 | 6.3e-19 | 134 | 184 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Csa09g099240.1 134 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 184
59******9.**********954...5**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MEESNHLYQT NFSPRISEIR ASLSQIILGG GPNTLDSIFS LLTPSSSVEF ATTSFNTLNP 60
PPQLGSSVYL RQRDIIEKFH LQNRAISAPP PPLFSSSFDH HQTSELMLQA AAGTPAEAFA 120
AALAAGRTTK KKKLYRGVRQ RHWGKWVAEI RLPQNRMRVW LGTYDTAEAA AYAYDRAAYK 180
LRGEYARLNF PNLKDPSELL GLGDSSKLIA LKNAVDGKIQ SICQRVRKER AKKSAKVSKN 240
SSATADSSYS SSPEIISSSP ATMTTTAVNS EDSYWVSQMR LCNSENSSPA SVSVSDEIPA 300
TTATAAEDED AMMGVDTDGF LLARMPSFDP ELIWEVLAN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC066689 | 0.0 | AC066689.5 Arabidopsis thaliana chromosome 1 BAC F15H21 genomic sequence, complete sequence. |
| GenBank | AK228763 | 0.0 | AK228763.1 Arabidopsis thaliana mRNA for AP2-containing DNA-binding protein, complete cds, clone: RAFL16-09-E15. |
| GenBank | AY560876 | 0.0 | AY560876.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At1g64380) mRNA, complete cds. |
| GenBank | BT033082 | 0.0 | BT033082.1 Arabidopsis thaliana unknown protein (At1g64380) mRNA, complete cds. |
| GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
