PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa09g069040.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 599aa    MW: 66467.3 Da    PI: 4.7676
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa09g069040.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.3e-10189232248
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      elkr  r+++NRe+A  sRqRK+ ++   e+k+  + aeN +L+ +
  Csa09g069040.1 189 DELKRNVRLIRNRESAHLSRQRKRHYV---EDKMSYFMAENVTLRHQ 232
                     689***********************9...589999*****999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-7186233No hitNo description
PfamPF001703.5E-8189233IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-6191234No hitNo description
CDDcd147049.21E-9193233No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MAEPVLEDTP DSYLSFSSEF DSIAISISPS PPSFDNFCNC SSDQAPLLKN SISDLRFFID  60
DDGDGDLELS FDDLYFPSEN ESFFVDGEMS GDFTPASETS GDCVNEESDK DTNGVLIRYD  120
RESPKDSDCS VTLQSLSRTN QFDQKLKVEE EEAATTKRKK EIEEEDTIEE ELRNYKFRRL  180
DQDGFAEDDE LKRNVRLIRN RESAHLSRQR KRHYVEDKMS YFMAENVTLR HQVGSGMSFL  240
PRPGMYYPVL YPWMQCPAYM VKPQGSQVAT LLPIPRLKPQ QSLAKVQKFK KVASLSVLGL  300
LFCLFLFGSL APIMNISYGG NRAHCGRDSD QEMGRNVSAT ENSGPRGSSS EPLVASLFVP  360
RNEKLVKIDG NLIIHSILAS EKAMASETKN EGGKSDEATT NKGIFHALPL PDSTRTGDTS  420
KHVYSEKRKA LSSSGSDDAS KDQLKPTTAN GKLQQWFREG VAGPMFSSGM CTDVFQFDIS  480
TTSGAIIPAS PPIQQSENTT DTHKGKKNRR ILRSGLPVSD VNLTKDYNSS SNENFRDTKP  540
SPPMVVSVLV DPREGGDEMM EGTNPLSQVF IVFLVDGVKY VTYSCVLPQP EVHNLVTT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa09g069040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019084904.10.0PREDICTED: LOW QUALITY PROTEIN: bZIP transcription factor 49-like
SwissprotQ9LXX40.0BZP49_ARATH; bZIP transcription factor 49
TrEMBLR0FMV20.0R0FMV2_9BRAS; Uncharacterized protein
STRINGCagra.0925s0079.1.p0.0(Capsella grandiflora)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16991911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.10.0basic region/leucine zipper motif protein 49
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]