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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Csa09g068910.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
NAC |
| Protein Properties |
Length: 398aa MW: 45951.4 Da PI: 7.7804 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa09g068910.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 99.7 | 4.1e-31 | 46 | 175 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkve..gkkleleev..ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
ppG+ ++P+d e++ L +k + g + el ++ i+ v+iy+++P +L +k+k+ +++ewyf skr+k + gkr++r +k gyWkat +k+
Csa09g068910.1 46 PPGVNYRPKDLEVI-SLLGRKQDyfGGNRELLDTlsIHVVNIYESNPDELSEKFKKaNDTEWYFISKRNKMGKDGKRQTRDAKGGYWKATVASKK 139
9*************.778777541134434433225**************9554442788*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + ++ lvg k+ L ++ g++p+g+kt+W+mhey +
Csa09g068910.1 140 IDA-GQGLVGYKTALSYFVGKRPHGKKTSWLMHEYWI 175
*99.999****************************75 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MSMPGRNKRK ERSLPEPEPE PSGIPSSSAD DHHSLSSSPS TRPCFPPGVN YRPKDLEVIS 60
LLGRKQDYFG GNRELLDTLS IHVVNIYESN PDELSEKFKK ANDTEWYFIS KRNKMGKDGK 120
RQTRDAKGGY WKATVASKKI DAGQGLVGYK TALSYFVGKR PHGKKTSWLM HEYWIDQCPS 180
ADDDVKDYSM CKIYRSPQAI NKQKKAEEEE NKRQKKVVQQ QPPTVEYHQP HALLDSYQPQ 240
PHHDIAYQQQ HLFQPAPLDS YQQQQQFWPG PLDSYRPHRW QFMAARPDSH QHYDSAYQQF 300
IRMLEGDNGG VQQQQPSFAP PPPPQGHDSR SGMAMSQEDG FFNPINELLN YEEEHGVVTE 360
KQQQEQSAPI LLNLQWWAIL YIYIYIYIYG KVKNTNY*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-20 | 37 | 202 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-20 | 37 | 202 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-20 | 37 | 202 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-20 | 37 | 202 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-20 | 37 | 202 | 12 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 2e-20 | 37 | 202 | 9 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-20 | 37 | 202 | 9 | 171 | NAC domain-containing protein 19 |
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