 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa09g068850.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 372aa MW: 42757.8 Da PI: 5.3349 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa09g068850.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 115.8 | 4.3e-36 | 59 | 187 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklel.eev.ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
ppG++F Ptdeel+ +yLk+ ++++k++ ++ i+ v+iy+++P++L +++++ +ekew+f s+r k+ ++ kr++r ++ gyW+at k+v
Csa09g068850.1 59 PPGYQFVPTDEELILYYLKPFLQKNKNSWlLSApIHYVNIYESNPQQLSEQFEKgNEKEWFFISERTKQGRSLKRQKRGANGGYWNATVAAKKVN 153
9**********************99954423345**************96555526779******9999999******99*************** PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++ vg kk+L +y g++p+g+kt W+mhey+
Csa09g068850.1 154 A-GKGIVGYKKVLEYYVGERPNGVKTCWLMHEYSS 187
9.9999***************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MAIPPRNKCK ARSSPERQTQ PTEWQTQPPP PKQNRDNPSS SSSIVDNFSS PSTKPFNFPP 60
GYQFVPTDEE LILYYLKPFL QKNKNSWLLS APIHYVNIYE SNPQQLSEQF EKGNEKEWFF 120
ISERTKQGRS LKRQKRGANG GYWNATVAAK KVNAGKGIVG YKKVLEYYVG ERPNGVKTCW 180
LMHEYSSESS SVDNEKVDYA LCKIYLTPKG AKKKKADQEE ENEKLKKEEE AVEHLDLHQP 240
DQSQPHDMVY QQPPYCLLDM IDVWLKNVEE QHGVSVDTQQ QQQEQCTPIL AHQQPEYCLL 300
PAEHQKPQTQ PFPYKFPELI SFEQEPVISE DFEDFFADFI KPHSLNGDED SSSYGLFEGF 360
DTQGMIKACT N*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-22 | 56 | 213 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-22 | 56 | 213 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-22 | 56 | 213 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-22 | 56 | 213 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 3e-22 | 56 | 213 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 3e-22 | 56 | 213 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 3e-22 | 56 | 213 | 15 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
