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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa09g068840.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
NAC |
Protein Properties |
Length: 522aa MW: 60061.1 Da PI: 4.6573 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa09g068840.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 101.3 | 1.3e-31 | 45 | 174 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev..ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
ppG+ ++P+d e++ L +k + el ++ i+ v+iy+++P +L +k+k+ +++ewyf skr+k + gkr++r +k gyW+at +k+
Csa09g068840.1 45 PPGVNYRPKDLEVI-SLLGRKQDYLGgnRELLDTlsIHVVNIYESNPDELSEKFKKaNDTEWYFISKRNKMGKDGKRQKRDAKGGYWHATVASKK 138
9*************.778777543333334433225**************9554442788*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + ++ lvg k+ L +y g++p+g+kt+W+mhey +
Csa09g068840.1 139 IDA-GQGLVGYKTALDYYVGKRPHGKKTSWLMHEYWI 174
*99.999****************************75 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 522 aa
Download sequence Send
to blast |
MMSMPGRNKR KERSLPEPEP EPSGIPSSSA DHSLSSSPST RPCFPPGVNY RPKDLEVISL 60 LGRKQDYLGG NRELLDTLSI HVVNIYESNP DELSEKFKKA NDTEWYFISK RNKMGKDGKR 120 QKRDAKGGYW HATVASKKID AGQGLVGYKT ALDYYVGKRP HGKKTSWLMH EYWIDQCPSA 180 DDDVKDYSMC KIYRSTQAIN KKKAEEEENK KQKRVVQQQS PTVEYHQPQP HHDIAFQQQH 240 LFKPAPLDSY QPQPHDLAYQ QQQQQFWPGP LDSYRMHQRQ FWAAPPDSHQ LQPSYDYAYQ 300 QLIRTLEEEN VGVQQQLAPP PPPQGQDSRS GMVMSQEDGF FNPINELLNY EEEHGVVTEK 360 QQQEQSAPIL PPPPPPQGHQ LQPYYDFAYQ QQQFRMTTTT LEEENVGATK HQEEELSLPP 420 PPPPPQGDQD SRSKMAMTRL SNDNSTEEDL FDMSDEDRFF DVDALFSNEE EEEEDGVDTQ 480 QQQQEQSTPI PPLQGQDDST SGNVMTSEDY DFLYLWNPWN Y*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-19 | 36 | 201 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-19 | 36 | 201 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-19 | 36 | 201 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-19 | 36 | 201 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-19 | 36 | 201 | 12 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-19 | 36 | 201 | 9 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-19 | 36 | 201 | 9 | 171 | NAC domain-containing protein 19 |