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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa09g068690.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 230aa MW: 26177.7 Da PI: 5.535 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa09g068690.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 81.4 | 9.6e-26 | 94 | 154 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dD y+WrKYGqK + s+fpr+YYrCt++ +Cp+kk+v+r +edp ++ +tY+++H+++
Csa09g068690.1 94 DDNYTWRKYGQKGILCSTFPRAYYRCTHQklyKCPAKKQVQRLDEDPYTFRVTYRSTHTCH 154
8****************************9999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MEEIMTMIFN GINLVKELEF SLSSQEPPES DLSNSLGLIS TLFGDANERL TILLAWRNSL 60 PQHEPVRMMD MMMQTEPALT QDHLLRGGWM FPPDDNYTWR KYGQKGILCS TFPRAYYRCT 120 HQKLYKCPAK KQVQRLDEDP YTFRVTYRST HTCHLFTTFP ISSAHTTTTT ANVPAVVNLA 180 EAMIRNMDSV VPLLGEPYFN HHCLVPGDDG DGDTWNSPSQ RYEMSSDPS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Publications
? help Back to Top |
- Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
An extracellular subtilase switch for immune priming in Arabidopsis. PLoS Pathog., 2013. 9(6): p. e1003445 [PMID:23818851] - Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
Correction: An Extracellular Subtilase Switch for Immune Priming in Arabidopsis. PLoS Pathog., 2016. 12(11): p. e1006003 [PMID:27806116]
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