 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa09g067970.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 355aa MW: 40583.1 Da PI: 10.073 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa09g067970.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 51.5 | 3.4e-16 | 46 | 142 | 2 | 94 |
NAM 2 ppGfrFhPtdeelvveyLkkk...vegkk.leleev.ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
ppGf F+P+d ++ L++k + g++ + + i+ v+iy+++P +L k+k+ +++ew+f sk++k + gk+++r k gyW+at ++
Csa09g067970.1 46 PPGFNFRPNDLDVF-LLLCRKrdyLGGNRdFL-VDLpIHLVNIYESNPGELTVKFKKgNDTEWFFISKKNKMGKGGKKQKRYDKGGYWHATVGSN 138
9***********99.56666624233333333.3555**************965555267799999999999999******99********9998 PP
NAM 91 evls 94
e+
Csa09g067970.1 139 EIDG 142
8865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MMSMPGRNKR KERSLPEAES EPSGNPSSSA DHSLSSPPPT RRFSFPPGFN FRPNDLDVFL 60
LLCRKRDYLG GNRDFLVDLP IHLVNIYESN PGELTVKFKK GNDTEWFFIS KKNKMGKGGK 120
KQKRYDKGGY WHATVGSNEI DGGQGLVVSA FCFCKDYSLC KIYRSTQAIN KQKKAEDEEN 180
EQQQPPTSDD ELTNGISQDE EESKETMKSS QKADRKKKKL KEKLLKEASK ADNRGVCYLS 240
RPEAQVHRKR AGGFRGQMFS EGWVEFAKKS VAKRVADMLN GEQIGGKKKS SIYYDIWNVK 300
YLTKFKWDDR TEEIAYKSAI REQKLNMVLS AAKREKNFYL SKIEKSRAMT EIDR*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK228191 | 1e-142 | AK228191.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-63-L15. |
| GenBank | BT010761 | 1e-142 | BT010761.1 Arabidopsis thaliana At3g56510 gene, complete cds. |
| GenBank | BT011791 | 1e-142 | BT011791.1 Arabidopsis thaliana At3g56510 mRNA, complete cds. |
