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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa09g064380.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
bZIP |
| Protein Properties |
Length: 406aa MW: 44394.8 Da PI: 6.6369 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa09g064380.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 46 | 1.2e-14 | 230 | 284 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
++kr+rr+ +NRe+ArrsR+RK++++ e + v +L ae ++L +l+ ++ +++
Csa09g064380.1 230 DVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLLTRLSDMNHKYD 284
68******************************************88888777766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MHIVFSVDDL TESFWPVPPP APSPGSTPAP TPSHNMADGM TRSQSEWAFH RLLNELSGSD 60
SSATTNATER SPPPVQSLSR VEETVDETED VVEIQKPQSH HHRLPSDDQG NRNRAPSSDP 120
LDSSAGGGVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSTVAQTS 180
PGASSVKFSS STSTQKKPDV PARQTTSISS RDDSDDDDLD GDADNGDPTD VKRARRMLSN 240
RESARRSRRR KQEQMNEFDT QVGQLRAEHS TLLTRLSDMN HKYDAAAVDN RILRADIETL 300
RTKVKMAEET VKRVTGVNPL HWARPNMGIP FNNTPSAPTR IPPNSNHILK PAVRSTTTSA 360
GLAPNQRVET ANFMPEQVDR EGMQNPFAPD SSNLYETLPH WNHKH*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 244 | 251 | RRSRRRKQ |
| 2 | 246 | 251 | SRRRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY057509 | 0.0 | AY057509.1 Arabidopsis thaliana bZIP transcription factor-like protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Jain P, et al.
A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation.
Sci Rep, 2017. 7(1): p. 14343
[PMID:29084982] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
Plant Cell, 2018. 30(2): p. 495-509
[PMID:29348240]
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