PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Csa08g054480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family | EIL | ||||||||
Protein Properties | Length: 279aa MW: 32300.4 Da PI: 4.221 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 152.6 | 5.1e-47 | 26 | 136 | 1 | 113 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 ++lk+rmwkd++l+++lk++k+++ ++ ++ + ++ e++rrkkm+r+QD++LkYM+k+mevc+a+GfvYgi+pekgkp +g+sdsLr+WW Csa08g054480.1 26 DDLKRRMWKDRNLMEKLKQQKRHNN---DV-VSLT--THRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWW 114 79********************964...44.4443..4899****************************************************** PP XXXXXXXXXXXXXXXXX....X CS EIN3 96 kekvefdrngpaaisky....q 113 ke+++f++n+p ai++y + Csa08g054480.1 115 KENIQFEQNAPDAITDYltlaA 136 *****************75542 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.5E-46 | 26 | 135 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
MVEVEEMEAL SPDEEEEEEE EEISYDDLKR RMWKDRNLME KLKQQKRHNN DVVSLTTHRA 60 EASRRKKMAR SQDSVLKYMM KIMEVCKAKG FVYGIVPEKG KPITGSSDSL RRWWKENIQF 120 EQNAPDAITD YLTLAAAAAE IIDNCPKSDV SFGFGDKNSR TGHEIQCLYG PTQEPSQAPS 180 IVTNTTSEDD YSENSSAMDK RSDDDHSNDV NWMDYFWLDR MQNELHCSRR FEDDDDNDGT 240 GMELNQFTES DQSDNVNQST FSVWDMVCED KDIYSFDY* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Csa08g054480.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AL356332 | 1e-136 | AL356332.1 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project). | |||
GenBank | CP002688 | 1e-136 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022553100.1 | 1e-115 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9LX16 | 8e-76 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A3N6QTY9 | 1e-117 | A0A3N6QTY9_BRACR; Uncharacterized protein | ||||
STRING | Bra006050.1-P | 1e-112 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16143 | 4 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 5e-70 | EIL family protein |
Publications ? help Back to Top | |||
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