 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa08g023770.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
Trihelix |
| Protein Properties |
Length: 354aa MW: 40681.8 Da PI: 6.8997 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa08g023770.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 31.9 | 3.5e-10 | 48 | 83 | 2 | 37 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskk 37
W ++e+l Li +r em++ ++++k++k+lWe++s+k
Csa08g023770.1 48 WVQDETLSLISLRGEMDNLFNTSKSNKHLWEQISSK 83
**********************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MMIDVTTSNG DLPTQQQHHH HHQIILLGDS SGGEDHEIKT PKKRAETWVQ DETLSLISLR 60
GEMDNLFNTS KSNKHLWEQI SSKGLIGHQL CSLRKLSIKM IKQRVEEQRR CAITKRLKIS 120
LEKETRKVAL YKSPATPPPS SSAKVDSFMQ FTDKGFEDSG ISFTSVEVLA IIGKPIAQQL 180
MVDNVKRILS CGSCLVLNLD MNCLMVFLWP LLLLIPSQQM EFLLGIGEMP LETVKQSRKL 240
FRSAFRLRTR RAFWLEDEEQ VVRSLDRDMP LGNYTLHVDE GIAVRVCHYD ESDPLPVHQE 300
EKIFYTEEDY RDFLARRGWT CLREFDAFGN IDMVRNIDNM DDLQPGVLYR GMR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB072370 | 1e-127 | AB072370.1 Arabidopsis thaliana mRNA for transcription factor GT-4, complete cds. |
