 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa08g001280.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
LBD |
| Protein Properties |
Length: 217aa MW: 23073.7 Da PI: 4.8674 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa08g001280.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 123 | 1.5e-38 | 11 | 112 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C aCk+lrrkC ++Cv+apyf +e+ +++fa+vhk+FGasn +kll +pe++r da+ +l yeA ar+rdPvyG+vg+i++lq+q+++l+ael
Csa08g001280.1 11 PCGACKFLRRKCLSECVFAPYFDSEEgTSHFAAVHKVFGASNASKLLMMIPESRRLDAVVTLSYEALARLRDPVYGCVGHIFALQHQVMNLQAEL 105
7*********************998879******************************************************************* PP
DUF260 95 allkeel 101
a ++++l
Csa08g001280.1 106 ADVQTQL 112
*999875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MSGSTTGGGG PCGACKFLRR KCLSECVFAP YFDSEEGTSH FAAVHKVFGA SNASKLLMMI 60
PESRRLDAVV TLSYEALARL RDPVYGCVGH IFALQHQVMN LQAELADVQT QLSSLQGLGQ 120
GNPQNNSATT EAASSFNAPL IASVVDNKSN TVSSSSYSSS HINCMQRQEQ KEESRESVDL 180
STLLGLEDPA EEDGDLNALA REFVSKYLTG GQSSPI*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB473855 | 1e-133 | AB473855.1 Arabidopsis thaliana ASL22 mRNA for ASYMMETRIC LEAVES2-like 22 protein, complete cds. |
