 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa07g064370.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
AP2 |
| Protein Properties |
Length: 351aa MW: 37044.4 Da PI: 7.0631 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa07g064370.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 51.6 | 2.3e-16 | 91 | 139 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r ++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g
Csa07g064370.1 91 LYRGIR-CR-SGKWVSEIREPKK---TTRVWLGTYPTPEMAAAAYDVAALALKG 139
69***9.55.6*********854...5************************998 PP
|
| 2 | AP2 | 51.6 | 2.3e-16 | 187 | 235 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r ++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g
Csa07g064370.1 187 LYRGIR-CR-SGKWVSEIREPKK---TTRVWLGTYPTPEMAAAAYDVAALALKG 235
69***9.55.6*********854...5************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MADPKNHITE PKAISQASSS SSVTIVPVRT CGDSVSDCAT CENPSPLDSI TSAATTTTVS 60
FAAPSPTTSG HGIKTLMSTD ADISRRKKHP LYRGIRCRSG KWVSEIREPK KTTRVWLGTY 120
PTPEMAAAAY DVAALALKGR DTVLNFPDSL XTTTVSFAAP SSTTSGHGIN TLMSTDADIS 180
RRKKHPLYRG IRCRSGKWVS EIREPKKTTR VWLGTYPTPE MAAAAYDVAA LALKGRDTVL 240
NFPDSVGSYP IPLSSSAAHI RCAAAAAAAA RGACTGAAAV KGGEEKEEEA CDGAGSSNTQ 300
LFVDEEELLN MPGLLADMAK GMMVAPPWMG SPPSDDSPEN SDGESLWSYY *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
