 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa07g049820.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 246aa MW: 27166.8 Da PI: 4.8651 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa07g049820.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61 | 2.6e-19 | 42 | 92 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+gy+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++aa++ ++g
Csa07g049820.1 42 PGYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDAAALTIKG 92
79*****998.**********843...6**********************99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MTESSITSVK LSSPMQEEDD HHHHHQEDSH RTNNKKRVRP DPGYRGVRMR TWGKWVSEIR 60
EPRKKSRIWL GTFSTPEMAA RAHDAAALTI KGTSAVLNFP ELATYLPRPA SSSPRDVQAA 120
AAVAAAMDFS SSSAPVVSDP TTIVISETHL SSSSYSTSTS SSLSPSSEEA ASTVEELSEI 180
VELPSLETSY DESWSEFVYV DSAYPPSSPW YFNNCYSFYY HSDENGISMG EPFESSNFGP 240
LFPFF*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC004260 | 0.0 | AC004260.1 Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete sequence. |
| GenBank | AY560875 | 0.0 | AY560875.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At1g77200) mRNA, complete cds. |
| GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
| GenBank | DQ446437 | 0.0 | DQ446437.1 Arabidopsis thaliana clone pENTR221-At1g77200 AP2 domain-containing transcription factor TINY (At1g77200) mRNA, complete cds. |
