 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa07g038490.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 136aa MW: 14642.8 Da PI: 5.1875 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa07g038490.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.5 | 5.8e-17 | 13 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+ykG+r++k +g+Wv+eIr+p + r+r +lg+f tae+Aa a++ a +l+
Csa07g038490.1 13 SKYKGIRRRK-WGKWVSEIRVPGT---RQRLWLGSFSTAEGAAVAHDVAFYCLHR 63
89*****998.**********943...5*********************999985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 136 aa
Download sequence Send
to blast |
MDSSRDAGET YQSKYKGIRR RKWGKWVSEI RVPGTRQRLW LGSFSTAEGA AVAHDVAFYC 60
LHRPSTLDDE SFNFPQLLPT SLASTTSPKS IQKAASDAGL AVDAGFNLNN DGAVSGSGGT 120
YEDRSPTADM EDEXS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC016162 | 1e-110 | AC016162.5 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete sequence. |
| GenBank | AC016163 | 1e-110 | AC016163.6 Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete sequence. |
| GenBank | BT010999 | 1e-110 | BT010999.1 Arabidopsis thaliana At1g71520 gene, complete cds. |
| GenBank | BT014816 | 1e-110 | BT014816.1 Arabidopsis thaliana At1g71520 gene, complete cds. |
| GenBank | CP002684 | 1e-110 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
