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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa07g034200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
CO-like |
Protein Properties |
Length: 428aa MW: 48549 Da PI: 4.646 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa07g034200.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 25.2 | 3.5e-08 | 14 | 57 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+ + + +++++C ++ +lC++C + H+ H++v
Csa07g034200.1 14 ARACDSCVKRRARWYCAADDAFLCHTCDGSVHSAnplarrHERV 57
578*****************************657888888876 PP
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2 | CCT | 68.4 | 1.9e-23 | 378 | 421 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++
Csa07g034200.1 378 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 421
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MMKSLASAVG GKTARACDSC VKRRARWYCA ADDAFLCHTC DGSVHSANPL ARRHERVRLK 60 TASTGKHRHA SSSSPPHQAT WHQGFTRKAR TPRGGKKSHT MVFHDLVPEM STEDQTESYE 120 VEGQLIFEVP VMNPMVEEQC FNESVETKIE FPMMPVCFKS SDEEDEDNAE SCLNGLFPTD 180 MELAQFTADV ETLLGGGIER DFHPTEDLGL GQMLKIKKEE VEEEEGVATR DVCDLNKVDE 240 TSPFEISFDY EYASKSTYEE EEEEEEEEEE EEEEEEEEDE KEDVIKNVMD MGVNEMSGNI 300 KEEKKEKALM LRLDYESVLS TWGGQGIPWT AQEPSEIDLD MVCCPTDSMG ETGADQAHHY 360 NHFRGLGLHM GEAGDGGREA RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR 420 SSIAAAH*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 388 | 404 | RRTRLFSKKIRYEVRKL |