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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa07g033540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 352aa MW: 39813.3 Da PI: 5.5152 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa07g033540.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.5 | 8.9e-31 | 211 | 270 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Csa07g033540.1 211 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 270
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MGIDLSLKFE AEEKDKDEEG SKHSCSENKE DEEHDASSGD EDEQMVKEDE EEDSCLGSRT 60 REEENEREEI LQLQIQMESV KEENTRLRKL VEQTLEDYRH LEMKFPVIDQ TKKMGLETFL 120 GAKGKWCVDI TSKARKRGAE ISPSVERELG LSLSLQKKQK QEESKEAVQS HHQQRYNNSS 180 LDMNAPRIIS SSQGNRKARV SVRARCETAT MNDGCQWRKY GQKTAKGNPC PRAYYRCTVA 240 PGCPVRKQVQ RCLEDMSILI TTYEGTHNHP LPVGATAMAS TASTSPFLLL DSSDNLSHPS 300 YYQTPPIIDS SLITYPQNST TNNRTIRSLN FDGPSRGDHV SSPQNQLNWM M*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 134 | 159 | RKRGAEISPSVERELGLSLSLQKKQK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493525 | 0.0 | AB493525.1 Arabidopsis thaliana At1g68150 mRNA for hypothetical protein, partial cds, clone: RAAt1g68150. |