 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa07g033540.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
WRKY |
| Protein Properties |
Length: 352aa MW: 39813.3 Da PI: 5.5152 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa07g033540.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.5 | 8.9e-31 | 211 | 270 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Csa07g033540.1 211 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 270
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MGIDLSLKFE AEEKDKDEEG SKHSCSENKE DEEHDASSGD EDEQMVKEDE EEDSCLGSRT 60
REEENEREEI LQLQIQMESV KEENTRLRKL VEQTLEDYRH LEMKFPVIDQ TKKMGLETFL 120
GAKGKWCVDI TSKARKRGAE ISPSVERELG LSLSLQKKQK QEESKEAVQS HHQQRYNNSS 180
LDMNAPRIIS SSQGNRKARV SVRARCETAT MNDGCQWRKY GQKTAKGNPC PRAYYRCTVA 240
PGCPVRKQVQ RCLEDMSILI TTYEGTHNHP LPVGATAMAS TASTSPFLLL DSSDNLSHPS 300
YYQTPPIIDS SLITYPQNST TNNRTIRSLN FDGPSRGDHV SSPQNQLNWM M*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 134 | 159 | RKRGAEISPSVERELGLSLSLQKKQK |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB493525 | 0.0 | AB493525.1 Arabidopsis thaliana At1g68150 mRNA for hypothetical protein, partial cds, clone: RAAt1g68150. |
