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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa07g007240.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
Dof |
Protein Properties |
Length: 174aa MW: 19241 Da PI: 9.9473 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa07g007240.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.1 | 4.4e-39 | 57 | 115 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk+k
Csa07g007240.1 57 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKP 115
68999***************************************************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 174 aa
Download sequence Send
to blast |
MATQDSQGIK LFGKTIAFNN TQTMKKEQEI KQPPEPDATT AVRSSSTSSD LTAEKRPDKI 60 IPCPRCKSME TKFCYFNNYN VNQPRHFCKG CHRYWTAGGA LRNVPVGAGR RKSKPPGRVM 120 IGMLGDGNGV HQVELINGLL VEEWQHAAAA AHGGFRHNFP MKRLRCYSDG QSC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Transcriptional repressor of 'CONSTANS' expression (By similarity). Regulates a photoperiodic flowering response. {ECO:0000250, ECO:0000269|PubMed:19619493}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night. {ECO:0000269|PubMed:19619493}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC002341 | 1e-163 | AC002341.3 Arabidopsis thaliana chromosome 2 clone T14G11 map TEn5, complete sequence. |
GenBank | AK221308 | 1e-163 | AK221308.1 Arabidopsis thaliana mRNA for putative DOF zinc finger protein, complete cds, clone: RAFL25-04-B19. |
GenBank | BT010496 | 1e-163 | BT010496.1 Arabidopsis thaliana At2g34140 gene, complete cds. |
GenBank | CP002685 | 1e-163 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |