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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa06g029080.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
bZIP |
| Protein Properties |
Length: 404aa MW: 44057.4 Da PI: 6.5715 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa06g029080.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 46 | 1.2e-14 | 229 | 283 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
++kr+rr+ +NRe+ArrsR+RK++++ e + v +L ae ++L +l+ ++ +++
Csa06g029080.1 229 DVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLLTRLSDMNHKYD 283
68******************************************88888777766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MHIVFSVDDL TESFWPVPPP APSPGSAPAP APSHNMADGM TRSQSEWAFH RLLNELSGSD 60
SSATTNATER SLPPVQSLSR VEETVDETED VVEIQKPQSH HRLHSDDQGN RNRAPSSDPL 120
DSSAGGGVDP NQYHAILKSK LELACAAVAL RVGTVKPEDS SASASNQKQA QGSTVAQTSP 180
GASSVKFSSS TSTHKKPDVP ARQTTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR 240
ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LLTRLSDMNH KYDAAAVDNR ILRADIETLR 300
TKVKMAEETV KRVTGVNPLH WARPNMGIPF NNTPSAPSRI PPNSNHILKS AVPSTTTNAG 360
LAPNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN HKH*
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| Nucleic Localization
Signal ? help
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| No. |
Start |
End |
Sequence |
| 1 | 243 | 250 | RRSRRRKQ |
| 2 | 245 | 250 | SRRRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY057509 | 0.0 | AY057509.1 Arabidopsis thaliana bZIP transcription factor-like protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Jain P, et al.
A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation.
Sci Rep, 2017. 7(1): p. 14343
[PMID:29084982] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
Plant Cell, 2018. 30(2): p. 495-509
[PMID:29348240]
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