 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa06g024740.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
BES1 |
| Protein Properties |
Length: 134aa MW: 14610.3 Da PI: 10.4526 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa06g024740.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 204.8 | 2.5e-63 | 14 | 133 | 1 | 129 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95
+++gr+ptwkErEnnkrRERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+v++DGttyrkgs+p+ +++ p+ss+q
Csa06g024740.1 14 AATGRMPTWKERENNKRRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPM---------ETTPPCSSIQ 99
579*************************************************************************.........8999****** PP
DUF822 96 sslkssalaspvesysaspksssfpspssldsis 129
+s++ssa++sp++sy+asp+sss+psp+++d+i+
Csa06g024740.1 100 LSPQSSAFQSPIPSYQASPSSSSYPSPTRFDHIP 133
*******************************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MTASGGGGGG GSTAATGRMP TWKERENNKR RERRRRAIAA KIFTGLRSQG NYKLPKHCDN 60
NEVLKALCLE AGWIVHEDGT TYRKGSRPME TTPPCSSIQL SPQSSAFQSP IPSYQASPSS 120
SSYPSPTRFD HIPN
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 8e-26 | 18 | 89 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 8e-26 | 18 | 89 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 8e-26 | 18 | 89 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 8e-26 | 18 | 89 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT002452 | 1e-144 | BT002452.1 Arabidopsis thaliana putative protein (At3g50750) mRNA, complete cds. |
| GenBank | BT006310 | 1e-144 | BT006310.1 Arabidopsis thaliana At3g50750 mRNA, complete cds. |
