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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa06g023540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
NAC |
Protein Properties |
Length: 454aa MW: 50599.9 Da PI: 5.7571 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa06g023540.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 162.9 | 1.2e-50 | 13 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lp+G+rF+Ptdeelv +yL+kk++g++ ++ ++i+e+di+k+ePwdLp + +k++++ew fF++ d+ky++g+r+nrat +gyWkatgkd++++
Csa06g023540.1 13 LPVGLRFRPTDEELVRYYLRKKINGHDGDV-KAIREIDICKWEPWDLPdfSVIKTKDSEWLFFCPLDRKYPNGSRQNRATVAGYWKATGKDRKIK 106
799************************999.88***************6448889999************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k++ +g+k+tLvf+ grapkg++t+Wv+heyr+
Csa06g023540.1 107 NGKTKIIGVKRTLVFHAGRAPKGTRTNWVIHEYRA 141
*9999****************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MNQNLEVLSM DSLPVGLRFR PTDEELVRYY LRKKINGHDG DVKAIREIDI CKWEPWDLPD 60 FSVIKTKDSE WLFFCPLDRK YPNGSRQNRA TVAGYWKATG KDRKIKNGKT KIIGVKRTLV 120 FHAGRAPKGT RTNWVIHEYR ATENDLSGTN PGQSPFVICK LFKKQELHLA EEDSKSDEVE 180 PAVSSPTVEV SEVTKTEDVK PYDIAESSLV ISGDSHSDAC DEATTAELVD FDWYPELDSL 240 DCKLFSPLHS QFQCELGGST FQPGSSNFSG NETNNFQVQT QYGTNEVDTY ISEFLDSILQ 300 SPDEDPEKHK YVLQSGFDGA TPDQVAPAYQ QGSAVGMSND VSVTGIQIRS RQAQFSGCTN 360 EYIAQGNGPR RLRLQTNLNG IDSKREAEDT VGESMNKGCR KLMRTKNKTG FVFKRIMPLK 420 CSYGGLLRAA VVAVVFLMSV CSLTVDFRAS AMP*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-46 | 3 | 165 | 7 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-46 | 3 | 165 | 7 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-46 | 3 | 165 | 7 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-46 | 3 | 165 | 7 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swm_B | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swm_C | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swm_D | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swp_A | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swp_B | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swp_C | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
3swp_D | 3e-46 | 3 | 165 | 10 | 169 | NAC domain-containing protein 19 |
4dul_A | 3e-46 | 3 | 165 | 7 | 166 | NAC domain-containing protein 19 |
4dul_B | 3e-46 | 3 | 165 | 7 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:20156199, PubMed:19947982). Transcriptional activator involved in response to cold stress. Mediates induction of pathogenesis-related (PR) genes independently of salicylic signaling in response to cold. Binds directly to the PR gene promoters and enhances plant resistance to pathogen infection, incorporating cold signals into pathogen resistance responses (PubMed:19947982). Plays a regulatory role in abscisic acid (ABA)-mediated drought-resistance response (PubMed:22967043). {ECO:0000269|PubMed:19947982, ECO:0000269|PubMed:20156199, ECO:0000269|PubMed:22967043}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salt, drought stress, abscisic acid (ABA), salicylic acid (SA) and methyl methanesulfonate (MMS) treatment. {ECO:0000269|PubMed:17158162}. |