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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa05g085380.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
TCP |
| Protein Properties |
Length: 359aa MW: 40698.5 Da PI: 6.6103 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa05g085380.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 138.7 | 4.8e-43 | 111 | 239 | 3 | 134 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaak 96
+k+drhski+T++g+RdRR+Rls+++a+rfFdLqd+LGfdk+sktieWL+ ++k++ik+l ++ + s+ +++++ ++++++ + + + +
Csa05g085380.1 111 KKRDRHSKICTAQGPRDRRMRLSLQIARRFFDLQDMLGFDKASKTIEWLFSKSKASIKQLKESVAASE--GgGDAEHVPANGKEK--DDQILKVE 201
79*************************************************************44444..323444444444322..33333345 PP
TCP 97 skksqksaasalnlakesrakarararertrekmrikn 134
+k+++++ + + ++kesr++ar+rarert km+++
Csa05g085380.1 202 VSKRRTKTMESSCKMKESRERARKRARERTMTKMKMRF 239
5566666666699999*******************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MFPSLDTNGY DLFDPFSPHQ ATMLPSFTTH IQSPSSHHHF PLPSFPFSPD FLDNVDESFL 60
LSQFLLQEQD AAANVFESPR KDCKKLEKKK KNEECVEDTT SETVPRRRTV KKRDRHSKIC 120
TAQGPRDRRM RLSLQIARRF FDLQDMLGFD KASKTIEWLF SKSKASIKQL KESVAASEGG 180
GDAEHVPANG KEKDDQILKV EVSKRRTKTM ESSCKMKESR ERARKRARER TMTKMKMRFS 240
GLTDTSETIS DPHQETREIK ITNGEQAIEG KSQEQEWSTN VNMVEYQMDS VSIIEKFLGL 300
TSDSSSSSIF GDSEESNTSL SSIRGIVAPN EHNTASIASV DEETNPISSF SLYDYLCY*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 219 | 229 | RERARKRARER |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
