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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa05g022840.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
Trihelix |
| Protein Properties |
Length: 317aa MW: 34843.2 Da PI: 8.0488 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa05g022840.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 92.3 | 4.9e-29 | 41 | 134 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs+++r++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s +++ +++
Csa05g022840.1 41 RWTRQEILVLIQGKRVAENRVRRGRaagmalgsgQLEPKWASVSSYCRRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQVKEETESYWVMRNDV 134
8**********************97778888888******************************************************999886 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050777 | Biological Process | negative regulation of immune response |
| GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MALEQQLGLG VSAVDGGGGE NSSAPSNDGG DDGVKTARLP RWTRQEILVL IQGKRVAENR 60
VRRGRAAGMA LGSGQLEPKW ASVSSYCRRH GVNRGPVQCR KRWSNLAGDY KKIKEWESQV 120
KEETESYWVM RNDVRREKKL PGFFDKEVYD IVDGGVIPPP AVPTLSLGLA PASEEGLLSD 180
FDRLDKLNST PVPKSVPDVV DKEKQAACGA DQGRVKEKHP GGANVEGAST SQEERKRKRT 240
STGEREEKEE EEGETKKMQN QLIEILERNG QLLAAQLEVQ NLNLKLDREQ RKDHGDSLVA 300
VLNKLADAVT KIADKL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY065364 | 0.0 | AY065364.1 Arabidopsis thaliana unknown protein (At2g33550) mRNA, complete cds. |
| GenBank | AY096389 | 0.0 | AY096389.1 Arabidopsis thaliana unknown protein (At2g33550) mRNA, complete cds. |
