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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa05g015240.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
G2-like |
| Protein Properties |
Length: 351aa MW: 39666.6 Da PI: 9.0265 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa05g015240.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.2 | 6.5e-32 | 51 | 104 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH rFv+ave+LGG+e+AtPk ++++m++kgL+++hvkSHLQ+YR+
Csa05g015240.1 51 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRS 104
8****************************************************7 PP
|
| 2 | G2-like | 101.2 | 6.5e-32 | 184 | 237 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH rFv+ave+LGG+e+AtPk ++++m++kgL+++hvkSHLQ+YR+
Csa05g015240.1 184 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRS 237
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MISSMEGGEK TDREEEEDEG EGQESKASSN STVEESDKKT KVRPYVRSKV PRLRWTPDLH 60
LRFVRAVERL GGQERATPKL VRQMMNIKGL SIAHVKSHLQ MYRSKKIDDH GQDRNIYKLS 120
QLPMFRGYNH NNDSPFSMEG GEKTDREEEE DEGEGQESKA SSNSTVEESD KKTKVRPYVR 180
SKVPRLRWTP DLHLRFVRAV ERLGGQERAT PKLVRQMMNI KGLSIAHVKS HLQMYRSKKI 240
DDHGQDMEVN FQMLRCGVLA HTKQTGTTGK RNASTSLDLD LDLSLKITQP EKTVSEETES 300
AATTTDQTLS LSLCSGSSAL KKSRLIKTDD EEDRTVKSGC RQASTLDLTL *
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 6e-17 | 52 | 239 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 6e-17 | 52 | 239 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 6e-17 | 52 | 239 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 6e-17 | 52 | 239 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 8e-17 | 52 | 239 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK117689 | 1e-123 | AK117689.1 Arabidopsis thaliana At2g38300 mRNA for unknown protein, complete cds, clone: RAFL17-35-G17. |
| GenBank | BT004973 | 1e-123 | BT004973.1 Arabidopsis thaliana clone U50495 unknown protein (At2g38300) mRNA, complete cds. |
