 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa05g008920.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
G2-like |
| Protein Properties |
Length: 268aa MW: 29994.1 Da PI: 9.7402 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa05g008920.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.6 | 2.1e-31 | 52 | 105 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH Fv+av++LGG+++AtPk +l++m++kgL+++hvkSHLQ+YR+
Csa05g008920.1 52 PRLRWTPDLHLTFVRAVQRLGGPHRATPKLVLQMMNLKGLSIAHVKSHLQMYRS 105
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MAGPGTSPPG ICYTYLDLNR EEKNNEEESS VEDEDQVTSS NNVRQYVRSN MPRLRWTPDL 60
HLTFVRAVQR LGGPHRATPK LVLQMMNLKG LSIAHVKSHL QMYRSKKLEP SLSRHDFGAF 120
MSGQRSYLID SRCIPYGGDL RHASNSKTVP SRVLNQDAII TNLGGNFLMR PSSWLSGLCT 180
YNQDSIKNKT LPLLEIRKTI NEKRVRDEEV SSSVKRLKSI SGDGIQLPEI GICRQKPTDD 240
INTMLSLSLF STSSGDRNIA STNITER*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-17 | 53 | 107 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-17 | 53 | 107 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-17 | 53 | 107 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-17 | 53 | 107 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY074640 | 0.0 | AY074640.1 Arabidopsis thaliana F14N22.7/F14N22.7 mRNA, complete cds. |
