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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa04g049030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
Trihelix |
Protein Properties |
Length: 326aa MW: 37266.5 Da PI: 9.8041 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa04g049030.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 54.1 | 4.1e-17 | 22 | 101 | 2 | 72 |
trihelix 2 WtkqevlaLiearremeer.lrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72
Wt +e+l+Liea++ eer +rr++ +++ +W+++ +++++rg++r+++qC++kw+nl + ykki+e e++r
Csa04g049030.1 22 WTVSETLVLIEAKEMEEERrVRRSEkktenrnkSIELRWKWIEEYCWRRGCQRNQNQCNDKWDNLMRGYKKIREYERSRI 101
*************9544440444323444444499*****************************************9983 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MAEPSGGGAR EMVMREYRKG NWTVSETLVL IEAKEMEEER RVRRSEKKTE NRNKSIELRW 60 KWIEEYCWRR GCQRNQNQCN DKWDNLMRGY KKIREYERSR IESSFNTGSS SSRPASYWKM 120 EKSERKERSL PSNMLSRIYD ALAELVEKKT LPYGNGGQIL RVCQEFVAPM MAQAMHQIPT 180 TIVLSLQSPP PPQPLVLSHP PLPQPPLFTF HAEPIQPTVD TSGAKRRRTT TPRETTTKQG 240 ESTEDAEVMV GAAISRSALV VAQVIKESEE RQEMRHKEVM RLQERRLKME ESKADINRQG 300 MSGLVDAINQ LATSILALAS SSSLP*
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