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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Csa03g038340.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
NAC |
| Protein Properties |
Length: 546aa MW: 61421.3 Da PI: 4.4834 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa03g038340.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 158.3 | 3.2e-49 | 17 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
+pGfrFhPtdeelv++yLk+k+ +k+l++ +vi vd+yk++P++Lp + ++k+++++w++F++r++ky++ r++r t++gyWkatgkd+ +
Csa03g038340.1 17 APGFRFHPTDEELVMYYLKRKICRKRLRV-NVIGVVDVYKMDPQELPgQsMLKTGDRQWFYFTPRSRKYPNAARSSRGTETGYWKATGKDRVIEY 110
69***************************.99**************96347888999************************************99 PP
NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ vg+kktLvfy+grap+ge+tdWvmhey++
Csa03g038340.1 111 -NSRSVGIKKTLVFYRGRAPNGERTDWVMHEYTM 143
.999****************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 546 aa
Download sequence Send
to blast |
MAESSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPQE 60
LPGQSMLKTG DRQWFYFTPR SRKYPNAARS SRGTETGYWK ATGKDRVIEY NSRSVGIKKT 120
LVFYRGRAPN GERTDWVMHE YTMDEDELGR CKYPQDYYAL YKLFKKSGAG PKNGEQYGAP 180
FQEEEWVDDD NEDENTVAVP DQPVVRYEDE RRLFNPVCLQ LEDIDVLLNG IPDAPGVPPR 240
CIPQVHSEEE LQSTLVNDSA RDFVPNSQPY NRPSSFDSLE TTEATSIPLV FEKEDFIEMD 300
DLLIPELGAS STEKAAQVPN HGEFGDFNDF DQLFHDISMS LDMELIDQGT STNLTSVSSF 360
ANDTSNQRQQ FLYQQPQDQT PDNQLNNIMD PSTTLNQFTD EIWFQDDQAV LFDEQQAFSG 420
SFAPPSSGVI PDSTNPTMSV NAQDQERQNG GGTTSQFSSA LWALMDSIPS TPASACEGPL 480
NRTFVRMSSF SRIRFKANGT PVTNTIANKG IRNRGFLLLS IVGALCAIFW VFIATVRVSG 540
RTVFS*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Transcriptional activator that acts as positive regulator of AOX1A during mitochondrial dysfunction. Binds directly to AOX1A promoter. Mediates mitochondrial retrograde signaling. {ECO:0000269|PubMed:24045017}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By cold and drought stresses. {ECO:0000269|PubMed:17158162}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF361813 | 0.0 | AF361813.1 Arabidopsis thaliana F23M19.13/F23M19.13 mRNA, complete cds. |
| GenBank | AY133552 | 0.0 | AY133552.1 Arabidopsis thaliana At1g34190/F23M19.13 mRNA, complete cds. |
| GenBank | BT000730 | 0.0 | BT000730.1 Arabidopsis thaliana clone RAFL09-58-M22 (R18947) putative NAM (no apical meristem) protein (At1g34190) mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Van Aken O, et al.
Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases.
Plant Physiol., 2016. 171(3): p. 2150-65
[PMID:27208304] - Van Aken O,Ford E,Lister R,Huang S,Millar AH
Retrograde signalling caused by heritable mitochondrial dysfunction is partially mediated by ANAC017 and improves plant performance.
Plant J., 2016. 88(4): p. 542-558
[PMID:27425258] - Hu Z, et al.
Mitochondrial Defects Confer Tolerance against Cellulose Deficiency.
Plant Cell, 2016. 28(9): p. 2276-2290
[PMID:27543091] - Chi YH, et al.
The membrane-tethered NAC transcription factor, AtNTL7, contributes to ER-stress resistance in Arabidopsis.
Biochem. Biophys. Res. Commun., 2017. 488(4): p. 641-647
[PMID:28088515] - Van Aken O,Pogson BJ
Convergence of mitochondrial and chloroplastic ANAC017/PAP-dependent retrograde signalling pathways and suppression of programmed cell death.
Cell Death Differ., 2017. 24(6): p. 955-960
[PMID:28498364] - Cheng P, et al.
The ERA-Related GTPase AtERG2 Associated with Mitochondria 18S RNA Is Essential for Early Embryo Development in Arabidopsis.
Front Plant Sci, 2018. 9: p. 182
[PMID:29497438]
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