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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa03g026820.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
ERF |
Protein Properties |
Length: 181aa MW: 19354.9 Da PI: 10.8951 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa03g026820.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 78 | 145 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse..ng..........kr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +g+W+AeIr+ + +g r +r++lg+f taeeAa a+++a+ +l g
Csa03g026820.1 78 KKYRGVRQRP-WGKWAAEIRCaSRRahGGgggggkggggGRpQRIWLGTFETAEEAALAYDNAAIQLLG 145
59********.**********777797225688877664449**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 181 aa
Download sequence Send
to blast |
MKKIVRISFT DMEATDSSSS EDESSSSPPS SRRRGKKLVK EIVLDSSDPQ AEVRKTRFKI 60 RIPSRFLAAT KTTETKKKKY RGVRQRPWGK WAAEIRCASR RAHGGGGGGG KGGGGGRPQR 120 IWLGTFETAE EAALAYDNAA IQLLGPDAPT NFGRPDAAAP AVMKLQDSDA PSSAKTPPVV 180 *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 108 | 115 | GGKGGGGG |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY087064 | 9e-39 | AY087064.1 Arabidopsis thaliana clone 31252 mRNA, complete sequence. |