PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa02g074950.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 206aa    MW: 23901.1 Da    PI: 10.5716
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa02g074950.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.27.4e-0887148263
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     k+ +r +rk +NR +A+rsR +K++ +e  + k  +L+ eN++L ++      ++++ k+e+
  Csa02g074950.1  87 KDERRKKRKLSNRKSAQRSRIKKQKHLEDVRSKLNQLKFENRELDNRRRYVLYHCERIKMEN 148
                     7789**************************************99988777777777777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-880133No hitNo description
SMARTSM003382.2E-886150IPR004827Basic-leucine zipper domain
PfamPF077161.9E-487133IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.10588151IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.07E-890137No hitNo description
CDDcd147027.25E-1291130No hitNo description
PROSITE patternPS00036093108IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MSTISPVLSS EPILSNQLPA WETGFTSWGE ESDLFSIFNS PVSPMEINPG LDKTNPSQIQ  60
NQRYSSPGLK DKQPLHHTSS NGVSSDKDER RKKRKLSNRK SAQRSRIKKQ KHLEDVRSKL  120
NQLKFENREL DNRRRYVLYH CERIKMENDR LRLEHHALHE KLLNLRQALV MRQIQQNSTC  180
ATWSCVNSTI VTVNRNPSMM RDHVI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18895ERRKKRKL
289110RRKKRKLSNRKSAQRSRIKKQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa02g074950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010463712.11e-151PREDICTED: basic leucine zipper 43-like
TrEMBLR0GTW01e-110R0GTW0_9BRAS; Uncharacterized protein
STRINGXP_010463712.11e-151(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-42basic leucine-zipper 5