PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa02g073600.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family EIL
Protein Properties Length: 500aa    MW: 56890.5 Da    PI: 4.8051
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa02g073600.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34571.5e-139384181353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn...............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipek 80 
                     ++lkkrmwkd++l+++lk++k+++  ++++ +++ +s+               ++ e++rrkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pek
  Csa02g073600.1  38 DDLKKRMWKDRNLMCKLKQQKRDNH-HNSV-ISSPSSSstsasspvssssaivRRAEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEK 130
                     79********************986.4444.444444456788999************************************************* PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
            EIN3  81 gkpvegasdsLraWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                     gkpv+g+sdsLr+WWke+v+fd+++p+a+s+y   +a++li+s++s +   ++s+ h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPW
  Csa02g073600.1 131 GKPVTGSSDSLRRWWKENVQFDQTAPNAVSDYltlAAAQLISSNASLD---PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPW 222
                     **********************************999****9987777...99****************************************** PP

                     ---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX. CS
            EIN3 173 WPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss. 265
                     WP+G+elwwge+g ++ ++g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake++++++vlnqee+ ++++  +   
  Csa02g073600.1 223 WPNGTELWWGEQGaAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLKRLTISDDe 317
                     *************9999999*******************************************************************99999542 PP

                     .XXXXXXXXXXXXXXXXXXXX......XXXXXX.XXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXX CS
            EIN3 266 .slrkqspkvtlsceqkedve......gkkeskikhvqavktta.......gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadk 346
                      +  +q+p+v+   +++   +      +++e+ ++ ++++k+++       ++p+ +krk +++e++ ++ ++ ++tcq+s++ +s+++l+f dk
  Csa02g073600.1 318 dKDGDQEPSVFTCFDKESSLNpcflvaQDQEPAVS-MRKDKRADqecflvdQEPFGNKRKGEFVEQQEAMVSSNVYTCQNSSCASSDVSLGFVDK 411
                     2444477777665555554449***9888888855.777777667999999**************9999999999******************** PP

                     XXXXXXX CS
            EIN3 347 nsisqne 353
                     n ++ +e
  Csa02g073600.1 412 NLRTGHE 418
                     ****998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.5E-12438305No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-67181312IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.22E-58183308IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MVEVQDLEPL SPIQDEDDDD FEEEEGEFDR FGEDISYDDL KKRMWKDRNL MCKLKQQKRD  60
NHHNSVISSP SSSSTSASSP VSSSSAIVRR AEASRRKKMA RSQDSVLKYM MKIMEVCKAQ  120
GFVYGIVPEK GKPVTGSSDS LRRWWKENVQ FDQTAPNAVS DYLTLAAAQL ISSNASLDPN  180
SYIHMLHELQ DTTLGSLLSA LMQHCVPPQR RFPLEKGLAP PWWPNGTELW WGEQGAAAFE  240
HGPPPYRKPH DLRKAWKVSV LAAVIKHMSP NLERVRRLAR QSKCLQDKMM AKETDTWSRV  300
LNQEEARLKR LTISDDEDKD GDQEPSVFTC FDKESSLNPC FLVAQDQEPA VSMRKDKRAD  360
QECFLVDQEP FGNKRKGEFV EQQEAMVSSN VYTCQNSSCA SSDVSLGFVD KNLRTGHEIE  420
CLYGNQEPMN HVAVARTDYL WFERLHDLNC SDQGFEDQTT AVDLNQLPNH SDSNQTMNEE  480
AFSLWDMGCE DKDVYMSQD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-571813111130Protein ETHYLENE INSENSITIVE 3
4zds_B2e-571813111130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa02g073600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0133950.0AB013395.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23.
GenBankAB4938140.0AB493814.1 Arabidopsis thaliana At5g65100 mRNA for hypothetical protein, partial cds, clone: RAAt5g65100.
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010484313.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ50.0EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLR0GUK90.0R0GUK9_9BRAS; Uncharacterized protein
STRINGXP_010484313.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.10.0EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]