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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa02g068560.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
ERF |
| Protein Properties |
Length: 206aa MW: 23230.9 Da PI: 5.897 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g068560.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.2 | 3.6e-17 | 110 | 160 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + k r++lg+f + +Aa+a++ a+ kl+g
Csa02g068560.1 110 HYRGVRRRP-WGKFAAEIRDPAK--KGSRIWLGTFESDIDAARAYDYAAFKLRG 160
7********.**********954..34*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MATLEESSDM DVMLQKHLFD DLMIPDDFIE DFVFDDTAFV SGLWSLETFN PPVPKLEPSS 60
PVLDPDSYVQ EFLQVEAESS SSSSSITTSP EVETVSNRKK TKRFEEMTRH YRGVRRRPWG 120
KFAAEIRDPA KKGSRIWLGT FESDIDAARA YDYAAFKLRG RKAVLNFPLD AGKYDAPVNS 180
CRKRRRSDVP QPRGTRTSTS SSSSN*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 181 | 185 | RKRRR |
| 2 | 181 | 186 | RKRRRS |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB012239 | 0.0 | AB012239.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9. |
| GenBank | AY045968 | 0.0 | AY045968.1 Arabidopsis thaliana putative ethylene responsive element binding factor (At5g61590) mRNA, complete cds. |
| GenBank | AY079321 | 0.0 | AY079321.1 Arabidopsis thaliana putative ethylene responsive element binding factor (At5g61590) mRNA, complete cds. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Suh MC,Go YS
DEWAX-mediated transcriptional repression of cuticular wax biosynthesis in Arabidopsis thaliana.
Plant Signal Behav, 2014. 9(8): p. e29463
[PMID:25763625] - Cui F, et al.
Dissecting Abscisic Acid Signaling Pathways Involved in Cuticle Formation.
Mol Plant, 2016. 9(6): p. 926-38
[PMID:27060495] - Walper E,Weiste C,Mueller MJ,Hamberg M,Dröge-Laser W
Screen Identifying Arabidopsis Transcription Factors Involved in the Response to 9-Lipoxygenase-Derived Oxylipins.
PLoS ONE, 2016. 11(4): p. e0153216
[PMID:27073862] - Ju S,Go YS,Choi HJ,Park JM,Suh MC
DEWAX Transcription Factor Is Involved in Resistance to Botrytis cinerea in Arabidopsis thaliana and Camelina sativa.
Front Plant Sci, 2017. 8: p. 1210
[PMID:28744297] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
Plant Cell, 2018. 30(1): p. 178-195
[PMID:29317470]
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