 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa02g064490.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
MYB |
| Protein Properties |
Length: 436aa MW: 49176.8 Da PI: 8.8584 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g064490.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 54.4 | 2.8e-17 | 107 | 153 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT++Ed +l+++v+q+G + W+ I++++ gR +kqc++rw+++l
Csa02g064490.1 107 KGQWTADEDRKLIRLVRQHGERKWAMISEKLE-GRAGKQCRERWHNHL 153
799*****************************.*************97 PP
|
| 2 | Myb_DNA-binding | 46.2 | 1e-14 | 160 | 201 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+ W++eE+ lv+ + + G++ W+ Ia+ ++ gRt++++k++w+
Csa02g064490.1 160 DGWSEEEERVLVESHMRIGNK-WAEIAKLIP-GRTENSIKNHWN 201
56*******************.*********.***********8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MEDRRFVHGA APPLTAVDRF LYGQKNDALC SKKQECSRDQ AIVKTKMSMI ETRSNNKKNT 60
TFGPTREKHL VLNGGNRSPI GEVVTTKRAA RYSQNNTKKR PYMNLIKGQW TADEDRKLIR 120
LVRQHGERKW AMISEKLEGR AGKQCRERWH NHLRPDIKKD GWSEEEERVL VESHMRIGNK 180
WAEIAKLIPG RTENSIKNHW NATKRRQNSK RKHKRESKAD NNDSDGSPSA KRPCILQDYI 240
KSIDNNGIYK NNNDENKNET TISVISTPNL DRQIYSDGDS AASSILGDPY DEELDYLHNL 300
FANHPISLEN IGLSQTSDEV TQSSSSGIMI KSPNLNLHNN FGTHHQEATI AAPASTPHLA 360
SDMYISYLLN GTTSSYLDTH FPSSSSSTSS TPIEHGGHND FLEPQANSTT ERREMDLIEM 420
LSGSIQGSNI CFPLF*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 203 | 214 | KRRQNSKRKHKR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor required for female gametophyte fertility. Acts redundantly with MYB64 to initiate the FG5 transition during female gametophyte development. The FG5 transition represents the switch between free nuclear divisions and cellularization-differentiation in female gametophyte, and occurs during developmental stage FG5. {ECO:0000269|PubMed:24068955}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF371978 | 0.0 | AF371978.1 Arabidopsis thaliana putative transcription factor MYB119 (MYB119) mRNA, complete cds. |
