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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa02g039410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
NAC |
Protein Properties |
Length: 194aa MW: 22877.7 Da PI: 4.5773 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa02g039410.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 101.3 | 1.3e-31 | 17 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF+P de+lv eyL+kkv ++++++ ++e++ ++v+PwdL +++ke+y+F+k+++++ rk r t sgyW++ + +ev+++
Csa02g039410.1 17 LPPGFRFDPDDEDLVFEYLAKKVLHRPMDF--DLPELRSCNVDPWDLL---GEKNKEVYYFVKKEERE----RKGRETLSGYWEECEE-EEVMEA 101
79*************************999..49*************6...56789*******99875....899*********8866.677776 PP
NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128
++l g +kt++fy g++p+g+ t W+m e+rl
Csa02g039410.1 102 gdreCSHLEGRRKTFAFYIGKRPRGTITPWIMYEFRL 138
45555666***************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MDISAQRFAM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE LRSCNVDPWD 60 LLGEKNKEVY YFVKKEERER KGRETLSGYW EECEEEEVME AGDRECSHLE GRRKTFAFYI 120 GKRPRGTITP WIMYEFRLIS SRATRWSTSL LSRGDLGKWR AVKVVVKEEN EEEMVEDELE 180 SDESDGEEVI QSR*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-19 | 15 | 150 | 15 | 154 | NAC domain-containing protein 19 |
4dul_B | 2e-19 | 15 | 150 | 15 | 154 | NAC domain-containing protein 19 |
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