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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa02g039410.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 194aa MW: 22877.7 Da PI: 4.5773 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g039410.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 101.3 | 1.3e-31 | 17 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF+P de+lv eyL+kkv ++++++ ++e++ ++v+PwdL +++ke+y+F+k+++++ rk r t sgyW++ + +ev+++
Csa02g039410.1 17 LPPGFRFDPDDEDLVFEYLAKKVLHRPMDF--DLPELRSCNVDPWDLL---GEKNKEVYYFVKKEERE----RKGRETLSGYWEECEE-EEVMEA 101
79*************************999..49*************6...56789*******99875....899*********8866.677776 PP
NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128
++l g +kt++fy g++p+g+ t W+m e+rl
Csa02g039410.1 102 gdreCSHLEGRRKTFAFYIGKRPRGTITPWIMYEFRL 138
45555666***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MDISAQRFAM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE LRSCNVDPWD 60
LLGEKNKEVY YFVKKEERER KGRETLSGYW EECEEEEVME AGDRECSHLE GRRKTFAFYI 120
GKRPRGTITP WIMYEFRLIS SRATRWSTSL LSRGDLGKWR AVKVVVKEEN EEEMVEDELE 180
SDESDGEEVI QSR*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-19 | 15 | 150 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-19 | 15 | 150 | 15 | 154 | NAC domain-containing protein 19 |
| 4dul_B | 2e-19 | 15 | 150 | 15 | 154 | NAC domain-containing protein 19 |
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