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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa02g035670.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 411aa MW: 45939.1 Da PI: 7.2051 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa02g035670.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.3 | 1.6e-33 | 231 | 289 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt+ C vkk+vers++dp++v +tYeg+H+h+
Csa02g035670.1 231 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVACGVKKRVERSSDDPSIVMTTYEGQHTHP 289
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010200 | Biological Process | response to chitin |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MEKKIEEDHH HHHHQEKQQK EIKNTVTKIE HQRRQEQQQR QQISQASSSS NIMANLVTSS 60 DHHHHQLELA AGNNLSSIFD TSSLPFPYSY FEDQSSNNPN SFLDLLRQDH QFASSSNSSS 120 FSFDAFPLPT NNNNPFFTDL PLPQAESSEV VNTAPTSPNS TSFSSSSNEA ANDNNNSGKE 180 VTVKDQEEGD QQQDQKGTTT TKPQLKAKKK NQKKAREARF AFLTKSDIDN LDDGYRWRKY 240 GQKAVKNSPY PRSYYRCTTV ACGVKKRVER SSDDPSIVMT TYEGQHTHPF PMTPRGHIGM 300 LTSPILDHGA TTASSSSFSI PQPRYLLTQH HQPYNMYTNS SLSMINRSSS DGTFVNPGPS 360 SSFPGFGYDI SQASTSTSSS IRDHGLLQDI LPSQIRSDSV NTQTNEEVKK *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF442397 | 0.0 | AF442397.1 Arabidopsis thaliana WRKY transcription factor 48 (WRKY48) mRNA, complete cds. |
GenBank | AY063870 | 0.0 | AY063870.1 Arabidopsis thaliana unknown protein (At5g49520) mRNA, complete cds. |
GenBank | AY091224 | 0.0 | AY091224.1 Arabidopsis thaliana unknown protein (At5g49520) mRNA, complete cds. |