 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa02g026940.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
BES1 |
| Protein Properties |
Length: 293aa MW: 33487.4 Da PI: 9.2339 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g026940.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 147 | 1.6e-45 | 48 | 127 | 3 | 80 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeae 80
++r+ptw+ErEnnkrRERrRR +aaki++GLR++Gnyklpk++DnneVlkALc+ AGw+ve+DGtty k + + ee+e
Csa02g026940.1 48 GTRMPTWRERENNKRRERRRREMAAKIFTGLRMYGNYKLPKHCDNNEVLKALCNGAGWTVEPDGTTYSKMKIEQegEEKE 127
78******************************************************************876655333333 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MEYVNPEGLR LDVADSMSSG VFEMGNTKEI AVVYGPREKQ RTKKMTLGTR MPTWRERENN 60
KRRERRRREM AAKIFTGLRM YGNYKLPKHC DNNEVLKALC NGAGWTVEPD GTTYSKMKIE 120
QEGEEKEKEK RSVFGNQRRR KEADDSFNVL IVLKFAGEGG ERVDVQKLFA YIGLFTLVAL 180
WWLVWPLTAL GMNPSLPYHT LKVDEVVLAN GFVGSVLSEY FWYITMILCC QLDDSKSLAF 240
SDNFSKNLSS TETLSLEIYH SNNNIKRNTN LSQTQKLENL IGLRVNGIDI AK*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 2e-17 | 50 | 116 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 2e-17 | 50 | 116 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 2e-17 | 50 | 116 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 2e-17 | 50 | 116 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 61 | 68 | RRERRRRE |
| 2 | 63 | 68 | ERRRRE |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY057538 | 3e-64 | AY057538.1 Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds. |
| GenBank | AY113057 | 3e-64 | AY113057.1 Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds. |
