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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa02g026630.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
DBB |
Protein Properties |
Length: 251aa MW: 27407.2 Da PI: 4.6428 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa02g026630.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 17 | 1.2e-05 | 4 | 44 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Ht 38
C+ +e+ e++ C +++ lC+ C + H+ H+
Csa02g026630.1 4 LCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEAnkifqrhHR 44
7*****************************76778888444 PP
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2 | zf-B_box | 25.2 | 3.3e-08 | 60 | 97 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeH..kgHt 38
++ C+ ++e + +fC +++ llC+dC ++H ++H+
Csa02g026630.1 60 APLCDICQERKGYFFCIEDRALLCNDCDGAIHtcNSHQ 97
689******99********************9434487 PP
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3 | zf-B_box | 17.8 | 6.8e-06 | 161 | 186 | 15 | 38 |
zf-B_box 15 qlfCedCqqllCedClleeH..kgHt 38
+fC +++ llC+dC ++H ++H+
Csa02g026630.1 161 YFFCIEDRALLCNDCDGAIHtcNSHQ 186
69*****************9434487 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MKILCEVCEK AEAEVLCCSD EAVLCKPCDI KVHEANKIFQ RHHRVALQKD AASATTSSGA 60 PLCDICQERK GYFFCIEDRA LLCNDCDGAI HTCNSHQRFL LPGVQVSDQS LTENSGCSTS 120 FSSETYQTHS KASLNSQYSN EETEAGNSAE IDKNPSERKG YFFCIEDRAL LCNDCDGAIH 180 TCNSHQRFLL PGVQVSDQSL TENSGCSTSF SSETYQTHSK ASLNSQYSNE ETEAGNSAEI 240 DKNPSVILNP *
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in seedling photomorphogenesis. {ECO:0000250|UniProtKB:Q9SJU5}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY122916 | 1e-180 | AY122916.1 Arabidopsis thaliana putative zinc-finger protein (At4g10240) mRNA, complete cds. |