 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa02g020550.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 304aa MW: 32986.6 Da PI: 4.5233 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g020550.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.3 | 9.5e-19 | 94 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdps r r++lg+f taeeAa +++a+ +l+g
Csa02g020550.1 94 KFRGVRQRP-WGKWAAEIRDPS----RrVRVWLGTFSTAEEAAVVYDNAAIQLRG 143
89*******.**********84....34*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042991 | Biological Process | transcription factor import into nucleus |
| GO:0048825 | Biological Process | cotyledon development |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
METELKKLKN IVTQPRILRI SVTDPYATDS SSDEDEEQGF QAKRRRVKKY VNEVVLESVS 60
SDDKDKSMIT KKKRKRTVDT ASPAVVVNPA ATRKFRGVRQ RPWGKWAAEI RDPSRRVRVW 120
LGTFSTAEEA AVVYDNAAIQ LRGPDALLNF PPPPPDPVTE NTEEASTVAE ETSGSISGGG 180
ECLGSPVSVL RSPFSGESTA VKKEFFGVSA TVEVKDEPLS TLSGTFTDFS ESLFSNDDVF 240
GFSTPMTDSY GGDLFGGDLF EDMSFGFGFG SGSGYGSGFS SWHVEDHFQD IGDLFGSDPL 300
LAV*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 42 | 46 | KRRRV |
| 2 | 71 | 76 | KKRKRT |
| Functional Description ? help
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| Source |
Description |
| UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |
