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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa02g005920.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
bZIP |
Protein Properties |
Length: 417aa MW: 45776.4 Da PI: 5.0055 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa02g005920.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.5 | 1.9e-15 | 217 | 270 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
++k+ rr+ +NRe+ArrsR+RK++++ Le+ v eL++e ++L k+l++++ ++
Csa02g005920.1 217 DVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNELKGEHSSLLKQLSNMNHKY 270
789*****************************************9888887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MMNSIFSIDD FSDPFWESPP IPLNPDSSKS VTAAEDQSEW TFEMFLEEFS SSAVSSEPLG 60 NDAIVGVSSA QSLPSVSGQN DFEEDDSRFR DRDSSGNRDC AAAAAATVVD DYHRVLKNKL 120 ESECATVVAL RAGFVKPEDS TSSPETQFQP VQSSPLTQGS LVSPGGEVGV ITSSLPAELK 180 KTGVPMKQVT SGSSREYSDD DDLDEENETT GSLNPEDVKK SRRMLSNRES ARRSRRRKQE 240 QTSDLETQVN ELKGEHSSLL KQLSNMNHKY DDAAVGNRIL KADIETLRAK VKMAEETVKR 300 VTGMNPMLLG RSNGHNNNNR MPLTGNHRMD SSSNIPAFQP HSNLNHMSNP NIGIPTTLPP 360 RLGNNFVPPP YLNSQTNSQM PRIRNGQNHH VAPNANPYGW TTEPQNDSAW PKKCVD*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 231 | 238 | RRSRRRKQ |
2 | 233 | 238 | SRRRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF310222 | 0.0 | AF310222.1 Arabidopsis thaliana bZIP protein BZO2H1 mRNA, complete cds, alternatively spliced. |