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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa01172s010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 194aa MW: 22284.3 Da PI: 10.0664 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa01172s010.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 64.5 | 1.1e-20 | 9 | 52 | 7 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
s v +s+R+++++ KAe LSvLC++ev+vi+++++g+l++++
Csa01172s010.1 9 SYPLVALSNRLETLFRKAEQLSVLCQIEVCVIYYGPQGELQTWP 52
555699*************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MRSLPSSSSY PLVALSNRLE TLFRKAEQLS VLCQIEVCVI YYGPQGELQT WPHEIEKVRD 60 MCVRYSRLNE SLRSKKRVNL SEFLKDKDKG LENPNKRRKT SSPKKNVDVL KYPISDHYSP 120 DQIPQLIQSL QLNISTFQRR LRFLESQEKH KLLDHHHQSL ASSSSLTTHS LNPSLHQSLA 180 SSSSLTTQSL NPSQ
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |