PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre16.g661650.t1.1
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family ERF
Protein Properties Length: 1636aa    MW: 154292 Da    PI: 6.7286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre16.g661650.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.3e-11358404153
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                         +gy GVr +k +g ++AeIrd        kr +lg+f ta eA  a++aa+   
  Cre16.g661650.t1.1 358 TGYVGVRMRK-WGMYAAEIRD------GdKRRWLGSFPTAMEAGLAYDAAAIVQ 404
                         69******99.**********......44*********************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.49E-17358416No hitNo description
PfamPF008474.4E-5358402IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-14359415IPR016177DNA-binding domain
PROSITE profilePS5103217.662359414IPR001471AP2/ERF domain
SMARTSM003808.5E-21359420IPR001471AP2/ERF domain
PRINTSPR003671.4E-5360371IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-19360414IPR001471AP2/ERF domain
PRINTSPR003671.4E-5396416IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1636 aa     Download sequence    Send to blast
MTGGLLAALA ASPPLGGGAS PAAGASDGGG LPLGIGGGGL GSSGGAAADG GLEGMQGAAP  60
GSGALGAGPG SAAGAGAGLP GLGDPPPVLL APAPPLDGMS MHLAQPAGGG LLPGMPGSSF  120
GGAGGSGGGA AGAVPGANSP PGGSEGGAGP LASLLSSLVP LPGMEGGQGA LAAREQQTGT  180
PPQDQATSPP LSAPGQLGSL PPGLNGAAQG APPSNLALHI AVLAALQQQA AAAAANGAGA  240
GAAAPGTGAL PRPAPLQAAL VQAAAQAAIM AAQRNAAAAQ AASRGGADDG AGGAGNGKGG  300
PGGADGRKRK RNNSPSPPPK AYGGGGAGAG GGGGMPGMGA LTHLAEDPDK DSPCRNQTGY  360
VGVRMRKWGM YAAEIRDGDK RRWLGSFPTA MEAGLAYDAA AIVQKGNKAK TNFAYQDQET  420
NPRPGAEMMP NVRWDLLPEE VAAQMSTRSA NVKIGKLGTG GPSNNGGPAG GSGGQRSRPP  480
KPPPPAHGGA AGAAAAARAG ANATNSSGAM VPPNAMAAAA AAMAAAVVAA NAKAKAGGKP  540
NSGPQGAAAA AAAAMLAAAK NAGAAANGGP TASAGGSVST GAGPPGSIMP GAPGGLQLPG  600
LGGLPLHLLP ADHPDLPDHP GMLQRQHAMG MQDMAGEGTA ASGGAGGHGG HGGHGGHVGG  660
GGGGGGGGGD PDRPNDHGAT SSEGGALGHH GLHDGMGAHH HGRRGAAAAA AAAAAAAAAE  720
DYPPDGEGGY PLPPGWPPGA PPPPLGPDGA PLGPYPGGLP PGYPPDYPYP LPPHAYGVLP  780
PGMDPAAAAA AAEEEDAYGA PHPAALYGRL PPGAGYPGVD PMAGMSPEGY EVEVDEHGVP  840
IYPPYGYPYP YPVMVGYEED GTPIYAYSEA PYGPYGYPYG YGAYEDEDAA AAAAAAAAGY  900
PPLPPHYQLA GPPPPAAAHL LPGARAGRHP QGAAGGRSDG GAEGAGGDAG LLEGAGGPHG  960
LLHRAGLRRP GAAGGSGGGA GGSGGGAAGG RAGHHHGLGA RGAGGSEAGA VDGARAGAMA  1020
AARRGMRGPA SEAGMQDGGH HPRGASGSSK AMDSLDTLAG AAAALAGEPG GMGGDGEGPG  1080
GAAGPHSAHL RPPARPTSHG SMGGGYPPYD PYGYYGPPPP YGAAPYHPAL MSPRGYSLAR  1140
TRSSGGGAHR GGSSGGAAAG VYGADGLPPA KRMAGGRSGG GAAGAPGRGG QGGGHDGASG  1200
SEAGGADGGR GADGPSPVRG PGYHPGMHPP PGSLYDPETG DPMDLYAHPP PYGAIPPYGP  1260
PAHGMLSYPP YDPYAPDPYY GYELPYGYAP EDEEEEMAAA AAAAAGHPYP PPYGVSPYGY  1320
GPPPPHLYGR GGPYSRSGGG ASSGGGAAHG GRHPHAPPAD DGAEGHGGAA DLRGMGRAVA  1380
GGRDVSGGSA DLHGGHLPPP ALGGLHAAGY SHPLAPGAGA GYGARRAGAN GGGAAPSPYG  1440
VGSGGSDQHS PGQGAHQLPP PYHHPHAVPG AGRQAAHQGQ PHQASPYGAA GAPGGGAGGD  1500
GEGSTDLYLQ KFAELTQALK KVTGDGSSGG AAGNTGGGGA GPAAGGPGGG GIEDVIRSLS  1560
YFTGQMESGA GAVQHAPGQG AGGAVGAHHH HHHHQHHHGR HTHHVAAEHQ RGGVGGAGAE  1620
GSAHGRGVAG DGGGR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
111741180GGRSGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre16.g661650.t1.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3CTK60.0A0A2K3CTK6_CHLRE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1254833
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-16related to AP2 6l