PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre15.g639350.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

MYB_related

Protein Properties

Length: 2471aa MW: 240336 Da PI: 7.0914

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre15.g639350.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5.1e-07	53	88	2	39
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 rW+ eE +l+ ++++lG++ Wk a+++ +R++ + Cre15.g639350.t1.1 53 TRWSSEELAQLAVLHARLGSK-WKDLAKHFR-KRSERD 88 59*****************.*******.999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.144	47	97	IPR017877	Myb-like domain
SuperFamily	SSF46689	3.68E-6	51	99	IPR009057	Homeodomain-like
Pfam	PF00249	7.9E-6	53	88	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.3E-6	53	96	IPR009057	Homeodomain-like
CDD	cd00167	0.00616	54	91	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 2471 aa Download sequence Send to blast
MEEEEELSHH RPGDQGGASK AASGDAGRID DYAATPAGGK SALDKARAPR WTTRWSSEEL 60 AQLAVLHARL GSKWKDLAKH FRKRSERDAK NIFYSQQRCI TSDDTSNLGR ALLNAYAAAV 120 KDCSGDAAAR TAALAAAQER VGYVPGPMLE GDEAGGADGG GGGGAGGGGA GAGVAGGAAG 180 ADAFESGAAA GGPAVASGGS GRSKGSDGGA AGGGGAAMML PTAALAAAAG GNSSGDGASG 240 SMLSGIMSGH GGGSSSGVAT AAAGIAAGAA SAAAGAVASG DDSSRAVAVV HGHSGLRRPS 300 GQLQRLGSAS PPPPPPPPVG LGEEQEGEGP GINAGVRRAA AEGRLQWQLQ QPSLLAPLPP 360 PRAGGAAAGS MPQQQSQHII IPGVSPGKRC LEPRIEPLGA TTQQPLSAVA TTTAGAAAAT 420 GAAGAAAGIP SAADDESSVA AAAVAGTAGG GGCGGSGGGG GGGSGGGGGG RGEEWRRQLR 480 EQPRGLLGGF NQATTPVSPM SLSMMPDDQP LHVESQPQRP QTQQHQQRQQ QYWSGGGGGG 540 GGGHMGLAAA ATAATGGGGG STPGSSSSSG AFGAPTSTPA LLSPTAAPTP HVMANDGGGG 600 GGGGGVSGSW DPRAFMLLSA EAEAGVAGVT GGGGGGGGGG GGGGNGGGGG GDAAWAAAGW 660 ALPGRAVTAD GAGAGVGASC SFGVGTGVGG GASCSFGVGT GVGGGASCSF GVGTGVGGGA 720 NGSFGVGTGG GGASCSFGVG TGVGGGASCS FGVGTGVGGG ASCSFGVGTG VGGGANGSFG 780 VGTGGGGSGS GTWEQLTAAA VPTAPGGVMG GGGGGGNRFY ASSGGGGGAA AGTAGVAGGA 840 RFLNPLQHSG GSSRAFGPHP PFEATASLGF VPAEGGGAGG DVGGARGGGR YQCLASPPLL 900 HPAAGGLVGS SSGAGGSGGG GGGGSSNNGG VERSAGLLAA SWPAWAGDAA CAAGAAAAAA 960 AAAPATAVAA GGGNGMGSAL LARGNASGSI GSSGGLAAAA GQAAAAPQRF MPQQQQQQQH 1020 PQRPQLLRFP SAPIGGYGSY SYSYSYDVHS QLQLLQPPPP RLQPAVADSR GLLGSGLGLD 1080 PGLGSGTGVG SCVAVSTNDL AVAATAAGGG GPLTSSSTLL LLADSRIGTP EDPFHRLRCI 1140 SVGSGPAAAM HSGSRAGSAT GGASCSEGPP SSAAGGSGGG PGGGGPGGGF SGFSGFSGFS 1200 GFTGLLSSPQ SAPHFWPADS AAAAAPYGSP LNLLSPQQGH TQQHQQHQQH QLQPPLSPLS 1260 QLQQQLLLVP SAASQQQQAA AAPGGRFALP PPPRPVAVST FSYHTNSSGC GSGARTGGGG 1320 AASAAAGGDA TTTAAAGAGY IPPNSSVLSA PAQFLAAPPP MSHNYATSSS TNLFARGSFQ 1380 RLHSRPRLLQ SPAALDRHPN HRHHHHKDGE DRWAQAQAQA QAQAQAQAQA QAQAQAQAQA 1440 QAQAQAQAQD PFCRAMQHQQ QQQSSQQHAH DRRYSGHAQA HLSRQSQQQP QQKMQEQQPH 1500 HHHHHHHHHQ HQNHHEEHYE QRQRQQQQQQ QQQQQQQQQP EQQQLPPAPF MSAQLLPNTS 1560 SLTSTPSLAG APSLLPLPPS LPATAASATA ATAAAGEPPA ATRGTGDGSA GGATPATAER 1620 AAAGAPAAAA TATINPKNSA SLSPLGSLIS IFSQGSNALT ISPLPSADFA GTGLAAAPSG 1680 GGVGVSSSGG HGVISGSGGG GGGTTGAGWV SDMHVGGGMG APSDDGGADA PGDGAPGGFG 1740 GASVATAGPG GRDAGGAAGG AAGGAAGGAS SQQREQQRPP AWLMPPPAPP PPPPPHQQQQ 1800 ASLALLRAKQ HPPLAAAPSP LRQASAAAGA LATAAAAAAP AAAPTATTAA TDARDAMDID 1860 DDLGLDYEAG LLLLLLPPPS AARGSGAPAA AVAAHANIRH QQQLLQPPPP SLPAAAAAAG 1920 EAPPPGPPSA FSAADFDPMD AEEDLSDAAR RQPQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ 1980 QQQQQQQQQQ QQLTVAAPAA AAAAVVPRQA AQALQAATAM AAAAGGVPLS LSQPHRPPQP 2040 HYQQMLQPPP PPQQMFQQQQ APFQQQTTQQ PPSPRQYLHA QRHSQQQQLQ QQQQQLAPPV 2100 PHQQMWLHWR QGRRTTAPSS PLVDTVGSPS TYGGDTTPTV VGTAAAAAAA AAIHSGGGGG 2160 HAYGSGGMRS YHFSGEMCSS FGGGGGASGG SACGGRGGGD EVVAGGRPTH RPRLSLDVPR 2220 PGALQQQEEQ QQQQLQLQQQ QELQQVFLQH WGTPNPAQQQ QQQLLQLQQQ WHEKRLEVMQ 2280 RFGSSVGDGR TSQQGGGIVG GGGAGYGGAG TGGLQQGLVA MAVVSPASGA AAWMGGSRSS 2340 MQETEKHSSG SSSVKHPLLG LLPSPQQLQL QQQQRQLHTP ISLGPTSGGL ALTATAATAT 2400 ATAMATAAAV AVNAGGSSSS SGLAEAVAVL GLDGLDAELV GCLHQANDVI MVPSAQGNDE 2460 EESKREHHHM *

Sequence ? help Back to Top

Protein Sequence Length: 2471 aa Download sequence Send to blast

MEEEEELSHH RPGDQGGASK AASGDAGRID DYAATPAGGK SALDKARAPR WTTRWSSEEL  60
AQLAVLHARL GSKWKDLAKH FRKRSERDAK NIFYSQQRCI TSDDTSNLGR ALLNAYAAAV  120
KDCSGDAAAR TAALAAAQER VGYVPGPMLE GDEAGGADGG GGGGAGGGGA GAGVAGGAAG  180
ADAFESGAAA GGPAVASGGS GRSKGSDGGA AGGGGAAMML PTAALAAAAG GNSSGDGASG  240
SMLSGIMSGH GGGSSSGVAT AAAGIAAGAA SAAAGAVASG DDSSRAVAVV HGHSGLRRPS  300
GQLQRLGSAS PPPPPPPPVG LGEEQEGEGP GINAGVRRAA AEGRLQWQLQ QPSLLAPLPP  360
PRAGGAAAGS MPQQQSQHII IPGVSPGKRC LEPRIEPLGA TTQQPLSAVA TTTAGAAAAT  420
GAAGAAAGIP SAADDESSVA AAAVAGTAGG GGCGGSGGGG GGGSGGGGGG RGEEWRRQLR  480
EQPRGLLGGF NQATTPVSPM SLSMMPDDQP LHVESQPQRP QTQQHQQRQQ QYWSGGGGGG  540
GGGHMGLAAA ATAATGGGGG STPGSSSSSG AFGAPTSTPA LLSPTAAPTP HVMANDGGGG  600
GGGGGVSGSW DPRAFMLLSA EAEAGVAGVT GGGGGGGGGG GGGGNGGGGG GDAAWAAAGW  660
ALPGRAVTAD GAGAGVGASC SFGVGTGVGG GASCSFGVGT GVGGGASCSF GVGTGVGGGA  720
NGSFGVGTGG GGASCSFGVG TGVGGGASCS FGVGTGVGGG ASCSFGVGTG VGGGANGSFG  780
VGTGGGGSGS GTWEQLTAAA VPTAPGGVMG GGGGGGNRFY ASSGGGGGAA AGTAGVAGGA  840
RFLNPLQHSG GSSRAFGPHP PFEATASLGF VPAEGGGAGG DVGGARGGGR YQCLASPPLL  900
HPAAGGLVGS SSGAGGSGGG GGGGSSNNGG VERSAGLLAA SWPAWAGDAA CAAGAAAAAA  960
AAAPATAVAA GGGNGMGSAL LARGNASGSI GSSGGLAAAA GQAAAAPQRF MPQQQQQQQH  1020
PQRPQLLRFP SAPIGGYGSY SYSYSYDVHS QLQLLQPPPP RLQPAVADSR GLLGSGLGLD  1080
PGLGSGTGVG SCVAVSTNDL AVAATAAGGG GPLTSSSTLL LLADSRIGTP EDPFHRLRCI  1140
SVGSGPAAAM HSGSRAGSAT GGASCSEGPP SSAAGGSGGG PGGGGPGGGF SGFSGFSGFS  1200
GFTGLLSSPQ SAPHFWPADS AAAAAPYGSP LNLLSPQQGH TQQHQQHQQH QLQPPLSPLS  1260
QLQQQLLLVP SAASQQQQAA AAPGGRFALP PPPRPVAVST FSYHTNSSGC GSGARTGGGG  1320
AASAAAGGDA TTTAAAGAGY IPPNSSVLSA PAQFLAAPPP MSHNYATSSS TNLFARGSFQ  1380
RLHSRPRLLQ SPAALDRHPN HRHHHHKDGE DRWAQAQAQA QAQAQAQAQA QAQAQAQAQA  1440
QAQAQAQAQD PFCRAMQHQQ QQQSSQQHAH DRRYSGHAQA HLSRQSQQQP QQKMQEQQPH  1500
HHHHHHHHHQ HQNHHEEHYE QRQRQQQQQQ QQQQQQQQQP EQQQLPPAPF MSAQLLPNTS  1560
SLTSTPSLAG APSLLPLPPS LPATAASATA ATAAAGEPPA ATRGTGDGSA GGATPATAER  1620
AAAGAPAAAA TATINPKNSA SLSPLGSLIS IFSQGSNALT ISPLPSADFA GTGLAAAPSG  1680
GGVGVSSSGG HGVISGSGGG GGGTTGAGWV SDMHVGGGMG APSDDGGADA PGDGAPGGFG  1740
GASVATAGPG GRDAGGAAGG AAGGAAGGAS SQQREQQRPP AWLMPPPAPP PPPPPHQQQQ  1800
ASLALLRAKQ HPPLAAAPSP LRQASAAAGA LATAAAAAAP AAAPTATTAA TDARDAMDID  1860
DDLGLDYEAG LLLLLLPPPS AARGSGAPAA AVAAHANIRH QQQLLQPPPP SLPAAAAAAG  1920
EAPPPGPPSA FSAADFDPMD AEEDLSDAAR RQPQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ  1980
QQQQQQQQQQ QQLTVAAPAA AAAAVVPRQA AQALQAATAM AAAAGGVPLS LSQPHRPPQP  2040
HYQQMLQPPP PPQQMFQQQQ APFQQQTTQQ PPSPRQYLHA QRHSQQQQLQ QQQQQLAPPV  2100
PHQQMWLHWR QGRRTTAPSS PLVDTVGSPS TYGGDTTPTV VGTAAAAAAA AAIHSGGGGG  2160
HAYGSGGMRS YHFSGEMCSS FGGGGGASGG SACGGRGGGD EVVAGGRPTH RPRLSLDVPR  2220
PGALQQQEEQ QQQQLQLQQQ QELQQVFLQH WGTPNPAQQQ QQQLLQLQQQ WHEKRLEVMQ  2280
RFGSSVGDGR TSQQGGGIVG GGGAGYGGAG TGGLQQGLVA MAVVSPASGA AAWMGGSRSS  2340
MQETEKHSSG SSSVKHPLLG LLPSPQQLQL QQQQRQLHTP ISLGPTSGGL ALTATAATAT  2400
ATAMATAAAV AVNAGGSSSS SGLAEAVAVL GLDGLDAELV GCLHQANDVI MVPSAQGNDE  2460
EESKREHHHM *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre15.g639350.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3CWQ1	0.0	A0A2K3CWQ1_CHLRE; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	Cre15.g639350.t1.1