PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre11.g467581.t2.1
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family GATA
Protein Properties Length: 1189aa    MW: 111792 Da    PI: 6.481
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre11.g467581.t2.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA45.78.6e-15869901133
                GATA   1 CsnCgttkTplWRrgp.dgnktLCnaCGlyyrkk 33 
                         C nCgt++Tp WR+++ dg + LCnaCGly+ k+
  Cre11.g467581.t2.1 869 CKNCGTKSTPFWRKDKnDGRP-LCNACGLYFSKN 901
                         ****************78888.*********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577168.08E-13861912No hitNo description
Gene3DG3DSA:3.30.50.101.0E-18863915IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011417.964863921IPR000679Zinc finger, GATA-type
SMARTSM004011.5E-12863914IPR000679Zinc finger, GATA-type
CDDcd002024.05E-16868915No hitNo description
PROSITE patternPS003440869894IPR000679Zinc finger, GATA-type
PfamPF003202.6E-11869901IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1189 aa     Download sequence    Send to blast
MVLATHDGNG ATTTNDGSQR SQPETSQEDP ITTKVALNHD EQDDAKSGSG ANLGLPMPGA  60
GLNGGTMGGG GAGGGMSPAA AAAMMNSAMN PMAAAFSAMN MGGMGGANNP MAQAMQAAMA  120
GGMGGGMNPM AQMMQAMGGM GGMGGMGGMG GMGGMGQQQA AMAQAMQAMG TGGMGGMGGM  180
GGMGGMQYNP AAYMQQMMGP FAAMGMGGGM PGMMGAAAGA NGAAATSGAG GNANGTGASG  240
AGNGSNGGAA AAAGAAGSPG GAGAAAGGGG AGGGGGGGTP SGGSAGPNDV VTGMPLADIA  300
QQWQMAQQQQ AMMMYWWQMW MMSMMGYGGM GGMGPMAAAM GGGAGGGGGA DPASQMQAMM  360
ASMMGGGPMG GMGGMGNPAQ YQAMMQAMMM QMGAGMGGMG GMGGASNPMA AMMASMMGGG  420
GAAGANGAGA GAGGAAAGGP AAQWMQQAQA MQAAMAGAMG GGGANGMMGG MGPMAGMMNG  480
MGGMGAMPGM MGGMDPSAMA AAMGGASPAA AAAAQQQAQQ QQQQAAQAQA QAHAQAHQHA  540
HQQQQQQHAQ QHQQHQQHQQ QQPHQPQLPV QPQGHPGSTP ASATMGPMAV AMGFKGYHHH  600
QQQQHQHTPH HHDPSNGGHV APDSSPPHHM GGAGGAAADG GLASGSAGID PMDAAGGGGG  660
GGVLESPDDV DMVGVAASMG LNPHDMLGAG PMHGMLHGMH VPPGMGPMGP MGMLMLPANS  720
DEAYQEEDEG GSEVEDGDDS DAHQAFGSSQ HASGSHAQHQ QAAQHAQHNG YGQPHLQQHG  780
AAAAAGHYAG PQGVPQANPH QLAAAAAVLS AAAASAKRSL DQQGGGGGSN GFMARGGSSA  840
GLGGAGGLSG SNSNDSKRGR RATKEQKVCK NCGTKSTPFW RKDKNDGRPL CNACGLYFSK  900
NDAPRPKILW KQDEQAAAAA REGAGGASAP PSGGGSGSGA APAAASANPL LNDNSAAAAA  960
LVNAMTSRGL NPAAAISAIA AAAANANAKA GGTSPPGSSS GAPGAACAGA GGAGGVMGPA  1020
GAPGAVVAPG AAGAPPRPMQ PNYAAMAQVA MLAAAAAAKN GAAAAAAAAA AGGAPGAAGA  1080
RPPPPLGNPV AALAAAAAAM VRAGGGGIPG ATGAPGAAGL PAALAAAAAV AQSNQTAALL  1140
AAGAPGAGSP PPPLPPAGGS PVLIGADVGA VDAAVAPAAL PEIKAEAD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre11.g467581.t2.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3D7C00.0A0A2K3D7C0_CHLRE; Uncharacterized protein