PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre10.g438850.t1.2
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 477aa    MW: 49874.2 Da    PI: 7.1447
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre10.g438850.t1.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.3e-11258302347
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         +++r+rr+ +NRe+ArrsR+RK++ + +Lee+  +Le e+++L +
  Cre10.g438850.t1.2 258 DSRRARRMLSNRESARRSRRRKQEHLSKLEEERNVLEDERRELEN 302
                         579*************************************98864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-11256320IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.496258321IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.89E-9260308No hitNo description
PfamPF001706.1E-8260302IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-9260308No hitNo description
PROSITE patternPS000360263278IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-4309339No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MERQTSVDDL LGGFWRLGQA GMGRTDSEAA FQEFLKRIPS TTNLAAAVVE SSQGGASASQ  60
PAGASSSLPA GVLSDVVTSA AAAVGGIPRV PSLELLRQLV LPSSGAMPAV TAQGLAPASA  120
VKVETAAAAP PAPGAPAAPN SAFRLPEAVE VLKGAVVPPL PAPVALPPAP PLPTGYPLAG  180
IPALSDLASL SAVGAAALHG MPGFQPPPNP LAAALSPAAA AAAALQLGQL GTIGARHLSA  240
AHPATSGGNS DRDGDKVDSR RARRMLSNRE SARRSRRRKQ EHLSKLEEER NVLEDERREL  300
ENSYHTMERR AQSLEDENKR LKEENERLRD ELRFLRTEIA DRKDRNGYGH YRSGGGRLHA  360
DSDDEQAAKR HRHSDKSSSE EHPGACSDEV VEKRPRTAAT AAPVATNGTA TANGKHGGSA  420
AGGRGGGAPG ASNRAERAGG ERSRPEGKTR EARGRDRDRE REREAREMAD EDEDEE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272279RRSRRRKQ
2274279SRRRKQ
3452462RGRDRDRERER
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Cre.123950.0nutrient deficiency
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre10.g438850.t1.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3DAD20.0A0A2K3DAD2_CHLRE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP522889