PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cre07.g353555.t1.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
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Family | bHLH | ||||||||
Protein Properties | Length: 821aa MW: 79822.5 Da PI: 5.1958 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.5e-10 | 387 | 468 | 4 | 48 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C.......................................TTS-STCHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.as....................................kapskKlsKaeiLekAv 48 ah+ +E++RRdriN+ +e+L el+P ++ +++++K K +iL Av Cre07.g353555.t1.2 387 AHSTVEKQRRDRINNLIEQLGELVPVcDPrqrlaaaagatsatfeaaeaagaavaagggggggggGGGGGKRPKHAILADAV 468 8*************************66699999999999999999999999999999999999999999999999999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 7.98E-9 | 381 | 415 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.769 | 383 | 474 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-7 | 387 | 468 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.94E-6 | 387 | 419 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.3E-10 | 387 | 413 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.3E-7 | 389 | 480 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-10 | 454 | 487 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.98E-9 | 456 | 485 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 9.698 | 739 | 820 | IPR002912 | ACT domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 821 aa Download sequence Send to blast |
MSFLDYDLGE LDLAALLQND MPLPEGDTRG GTEQGPIASS LKREPESPAE LWDGAMQPSL 60 RKSPSCAWAP NGANSESDGV GSYRRSDSQL SFGAAFGGAA AATAAGGTSL HHDLNHVQST 120 LLCVGGGVNL FEDSDSDGGG SGFYSELTLL PPPPAAPVPP PRARGDTRIQ QQQQQQPAAA 180 PNSSLPPQNA SLAVTSSTAA NGTADVLLPA GGGGTAWQPP AAAAAAATLE VQTNLPMATA 240 PLSAATGAAV AQQPESISPL MTAPQQVATL VQQPLIPPIP RAPALPADTA AAIAFDPAAM 300 LAFLLPAATA AANAAASLLP AAGDAGPMLL PPPHRDSSIS GGTTAGGDNS SSGNGSGSGG 360 GAAATDGRGG SPGPAGSPLQ KSGGSIAHST VEKQRRDRIN NLIEQLGELV PVCDPRQRLA 420 AAAGATSATF EAAEAAGAAV AAGGGGGGGG GGGGGGKRPK HAILADAVVR YQQMQRDNEQ 480 LRRQLAAAAV SLAAAARPAA AAMVAAAAAA AAAAAADKAP SAVGTSGTTG TAAAPVATFP 540 PIAPLAIPEA TAASSIQPYP LMAPPVAAAA AAAAATTAAE GAAAGLATRR AAASITDGSG 600 IIAPGALAPA TAAPSTPAAF VPNCYYWPPT MPSAATGAAA AEYPEGATPP PGGAQSTGAP 660 VSPAAGGGGP LHASAAGHNA AAAAFTTSTA LPQRTLARPA LPPMPCLPPA TAPAPVPAPA 720 PATAAPAPAP APATASSWLV RVACPQRPGL VRVATAALTR AGVRLRSVVV RPPAKPFQNT 780 TLELEVWCEE EVMPREQQVA HIQAALETAL QAVVGENPAK * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Cre07.g353555.t1.2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001702042.1 | 0.0 | predicted protein | ||||
TrEMBL | A0A2K3DLI9 | 0.0 | A0A2K3DLI9_CHLRE; Uncharacterized protein | ||||
STRING | EDO97235 | 0.0 | (Chlamydomonas reinhardtii) |
Link Out ? help Back to Top | |
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Phytozome | Cre07.g353555.t1.2 |