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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_41232_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
AP2 |
Protein Properties |
Length: 364aa MW: 41468 Da PI: 6.996 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_41232_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.2 | 3.1e-16 | 147 | 198 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
Cotton_A_41232_BGI-A2_v1.0 147 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 198
89****99**********99966...3.6*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MAKLSQQNHK NTTQNNTSTA SNGVTKVKRT RRSVPRDSPP QLPNFVVIYA EYCFRHRWTG 60 RYEAHLWDKN CWNESQNKKG RQGAYDDEAA AAHAYDLAAL KYWGQDTILN FPLSTYQKEL 120 KEMEDQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA 180 TQEEAATAYD MAAIEYRGLN AVTNFDLSRY IKWLKPNQTK PENNPNPNPN IIDTTTTSLV 240 TPNPDQELDL TFFNGNNHNQ KLQESDVISE TLLTQPRPVN ATSALGLLLQ SSKFKEMMEM 300 TSAATDHRQS TSMISEPVRC GFPEDIQTYF ECQDSSCYGN GDDLIFGELN SFGPSMFQCD 360 QLDA
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |