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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_41147_BGI-A2_v1.0 |
Common Name | F383_19823 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
MYB |
Protein Properties |
Length: 519aa MW: 57415.8 Da PI: 8.2351 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_41147_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 41.2 | 3.9e-13 | 59 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48
+g WT+eEde l +av+ + g++Wk+Ia + R++ qc +rwqk+l
Cotton_A_41147_BGI-A2_v1.0 59 KGGWTPEEDETLRNAVAAFKGKSWKKIALAFAygaaeffPDRSEVQCLHRWQKVL 113
688****************************999*****9************986 PP
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2 | Myb_DNA-binding | 57.6 | 3e-18 | 119 | 165 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l
Cotton_A_41147_BGI-A2_v1.0 119 KGPWTQKEDDKIIELVSKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 165
79******************************.*************97 PP
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3 | Myb_DNA-binding | 52.4 | 1.2e-16 | 171 | 214 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+++WT eE++ l +a++ +G++ W+ Ia+ ++ gRt++ +k++w++
Cotton_A_41147_BGI-A2_v1.0 171 KDAWTMEEELALMNAHRTYGNK-WAEIAKVLP-GRTDNAIKNHWNS 214
679*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MAELRLEERC LYKKQLTTAS SSSVSEGGGN AVVKSPGVSS PAPTSPNHRR TTGPIRRAKG 60 GWTPEEDETL RNAVAAFKGK SWKKIALAFA YGAAEFFPDR SEVQCLHRWQ KVLNPDLVKG 120 PWTQKEDDKI IELVSKYGPT KWSVIAKSLP GRIGKQCRER WHNHLNPDIK KDAWTMEEEL 180 ALMNAHRTYG NKWAEIAKVL PGRTDNAIKN HWNSSLKKKL DFYLATGKLP PVSKNGLQNV 240 TKDIRTPTTQ NFLVCLKKES GSTAQTSSGT TDTCKLEEDG KDQLESSAPV QDMTASTNFI 300 PEEPTDTEST ECKLQSVDIN LCCCTSESGG KFGSHRISSQ VVEDKVLKEQ VGLDTPTYCS 360 LCCDESPRSQ HEWTSTPITS PISFFTPPCV KGSGLSIHSP EYILRIAAKS FLNTPSIFRK 420 RKMGAQVLTL PNKKGKLNEE IGKDGIQLSG EQERTENSSE QAQFCDGDPC ESPACQGDSP 480 TLPNSTVFNV SPPYRLRSNR TAVLKSVERQ LELTFDKEA
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325). {ECO:0000250|UniProtKB:Q94FL9, ECO:0000269|PubMed:26069325}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by ethylene, auxin (IAA), jasmonic acid (JA) and salicylic acid (SA). {ECO:0000269|PubMed:16463103}. |