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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_40524_BGI-A2_v1.0 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
C2H2 |
| Protein Properties |
Length: 354aa MW: 39890.5 Da PI: 7.3276 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_40524_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.5 | 0.0001 | 277 | 299 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
Cotton_A_40524_BGI-A2_v1.0 277 FMCRKCGKAFAVRGDWRTHEKNC 299
89*****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MADYPYTNFF SGWFKFNPVQ HYPSPNPPPP PPPHPLQQPN SFTHDFYSNS RNDRSSHINP 60
FFHYQTSFSS SSPPSSPVRE ALPLLSLSPT RQNNEDQDQD QCSWTTAMDE GRRLLFTNTT 120
VAEAEDETVT VALHIGLPSP SASELASVLS SSSEITDKDG DGDDSSGCAV NRLNKGQYWI 180
PTPSQILIGP TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTGMLRLPCY 240
CCAPGCRNNI DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG 300
KLWYCICGSD FKHKRSLKDH IKAFGNGHAA YGIDGMEEDD EPASEVEQDN DSMQ
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
