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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cotton_A_40387_BGI-A2_v1.0 |
| Common Name | F383_21585 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 320aa MW: 35601.7 Da PI: 7.0674 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_40387_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 105.2 | 3.7e-33 | 184 | 239 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFvea++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Cotton_A_40387_BGI-A2_v1.0 184 KQRRCWSPELHRRFVEALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 239
79****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MKKIDAFKRE LPLCMLLLKD GIERLKEEER QCKEMNDGSV TEENGRETMD NDGGDKKNWM 60
SSVQLWNSNF NNVDPHNKPN TVPELKLTSE EGEDGSESEN PIEICNKQRK GGAFVPFKEQ 120
ADKKVSGLSL MTPSSELASC ILKNNGGCRI GSGFSLYAQQ NQIKFQTKSQ IRHEEQPQQQ 180
NSRKQRRCWS PELHRRFVEA LQQLGGSQVA TPKQIRELMQ VDGLTNDEVK SHLQKYRLHI 240
RKLPASSSGQ GNELCSAQNQ CNGKMKASMS QSGSPQGPLL GSASAKDMSS TGGDSMDTED 300
ENSDGHSWRS GIKKPGEVDV
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-15 | 184 | 237 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-15 | 184 | 237 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-15 | 184 | 237 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-15 | 184 | 237 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX580318 | 1e-116 | JX580318.1 Gossypium hirsutum clone NBRI_GE12725 microsatellite sequence. |
